Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
THBS1P07996 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
THBS1P07996 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
THBS1P07996 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
THBS1P07996 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
THBS1P07996 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
THBS1P07996 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC15.4■□□□□ 0.06
THBS1P07996 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
THBS1P07996 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
THBS1P07996 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
THBS1P07996 MRPL20P1-201ENST00000400819 433 ntBASIC15.4■□□□□ 0.06
THBS1P07996 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC15.4■□□□□ 0.06
THBS1P07996 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
THBS1P07996 CDK2AP2P3-201ENST00000422476 372 ntBASIC15.4■□□□□ 0.06
THBS1P07996 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC15.4■□□□□ 0.06
THBS1P07996 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
THBS1P07996 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
THBS1P07996 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
THBS1P07996 AC006538.3-201ENST00000612495 578 ntBASIC15.4■□□□□ 0.06
THBS1P07996 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC15.4■□□□□ 0.06
THBS1P07996 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC15.4■□□□□ 0.06
THBS1P07996 AL391005.1-201ENST00000623953 2435 ntBASIC15.4■□□□□ 0.06
THBS1P07996 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC15.4■□□□□ 0.06
THBS1P07996 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC15.4■□□□□ 0.06
THBS1P07996 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
THBS1P07996 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
THBS1P07996 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
THBS1P07996 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
THBS1P07996 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
THBS1P07996 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
THBS1P07996 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC15.4■□□□□ 0.06
THBS1P07996 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
THBS1P07996 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
THBS1P07996 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC15.4■□□□□ 0.06
THBS1P07996 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC15.4■□□□□ 0.06
THBS1P07996 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
THBS1P07996 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
THBS1P07996 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
THBS1P07996 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
THBS1P07996 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
THBS1P07996 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC15.39■□□□□ 0.05
THBS1P07996 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
THBS1P07996 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
THBS1P07996 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
THBS1P07996 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC15.39■□□□□ 0.05
THBS1P07996 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
THBS1P07996 AC018695.7-201ENST00000624587 2492 ntBASIC15.39■□□□□ 0.05
THBS1P07996 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC15.39■□□□□ 0.05
THBS1P07996 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
THBS1P07996 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC15.39■□□□□ 0.05
THBS1P07996 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
THBS1P07996 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
THBS1P07996 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
THBS1P07996 AL662844.4-201ENST00000606367 2838 ntBASIC15.39■□□□□ 0.05
THBS1P07996 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC15.39■□□□□ 0.05
THBS1P07996 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
THBS1P07996 MED22-202ENST00000371999 987 ntTSL 3 BASIC15.39■□□□□ 0.05
THBS1P07996 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC15.39■□□□□ 0.05
THBS1P07996 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
THBS1P07996 HNRNPDP1-201ENST00000439535 754 ntBASIC15.39■□□□□ 0.05
THBS1P07996 STARD13-205ENST00000439831 945 ntTSL 2 BASIC15.39■□□□□ 0.05
THBS1P07996 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC15.39■□□□□ 0.05
THBS1P07996 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC15.39■□□□□ 0.05
THBS1P07996 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC15.39■□□□□ 0.05
THBS1P07996 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
THBS1P07996 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
THBS1P07996 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
THBS1P07996 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
THBS1P07996 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
THBS1P07996 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC15.39■□□□□ 0.05
THBS1P07996 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC15.39■□□□□ 0.05
THBS1P07996 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
THBS1P07996 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC15.39■□□□□ 0.05
THBS1P07996 CYP51A1P2-201ENST00000419457 1499 ntBASIC15.39■□□□□ 0.05
THBS1P07996 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
THBS1P07996 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC15.39■□□□□ 0.05
THBS1P07996 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
THBS1P07996 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
THBS1P07996 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
THBS1P07996 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC15.38■□□□□ 0.05
THBS1P07996 FER1L4-210ENST00000615531 5998 ntBASIC15.38■□□□□ 0.05
THBS1P07996 CROCCP1-201ENST00000426910 5675 ntBASIC15.38■□□□□ 0.05
THBS1P07996 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC15.38■□□□□ 0.05
THBS1P07996 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
THBS1P07996 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC15.38■□□□□ 0.05
THBS1P07996 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
THBS1P07996 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
THBS1P07996 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC15.38■□□□□ 0.05
THBS1P07996 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
THBS1P07996 MMP17-203ENST00000535004 719 ntTSL 3 BASIC15.38■□□□□ 0.05
THBS1P07996 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC15.38■□□□□ 0.05
THBS1P07996 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC15.38■□□□□ 0.05
THBS1P07996 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC15.38■□□□□ 0.05
THBS1P07996 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC15.38■□□□□ 0.05
THBS1P07996 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC15.38■□□□□ 0.05
THBS1P07996 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC15.38■□□□□ 0.05
THBS1P07996 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
THBS1P07996 GPAA1P2-202ENST00000606848 1787 ntBASIC15.38■□□□□ 0.05
THBS1P07996 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
THBS1P07996 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC15.38■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms