Protein–RNA interactions for Protein: O95503

CBX6, Chromobox protein homolog 6, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX6O95503 AL390719.2-201ENST00000606993 987 ntBASIC16.74■□□□□ 0.27
CBX6O95503 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC16.74■□□□□ 0.27
CBX6O95503 AC139530.3-201ENST00000620344 690 ntBASIC16.74■□□□□ 0.27
CBX6O95503 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
CBX6O95503 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CBX6O95503 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC16.74■□□□□ 0.27
CBX6O95503 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CBX6O95503 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CBX6O95503 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CBX6O95503 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC16.74■□□□□ 0.27
CBX6O95503 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CBX6O95503 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC16.74■□□□□ 0.27
CBX6O95503 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CBX6O95503 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
CBX6O95503 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CBX6O95503 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CBX6O95503 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
CBX6O95503 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CBX6O95503 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
CBX6O95503 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
CBX6O95503 PC-208ENST00000529047 1607 ntTSL 3 BASIC16.74■□□□□ 0.27
CBX6O95503 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC16.74■□□□□ 0.27
CBX6O95503 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CBX6O95503 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
CBX6O95503 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CBX6O95503 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CBX6O95503 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CBX6O95503 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CBX6O95503 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CBX6O95503 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CBX6O95503 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC16.73■□□□□ 0.27
CBX6O95503 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CBX6O95503 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC16.73■□□□□ 0.27
CBX6O95503 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC16.73■□□□□ 0.27
CBX6O95503 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CBX6O95503 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CBX6O95503 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC16.73■□□□□ 0.27
CBX6O95503 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CBX6O95503 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CBX6O95503 AC002558.1-201ENST00000488906 803 ntBASIC16.73■□□□□ 0.27
CBX6O95503 ABR-204ENST00000543210 1049 ntTSL 2 BASIC16.73■□□□□ 0.27
CBX6O95503 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
CBX6O95503 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC16.73■□□□□ 0.27
CBX6O95503 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
CBX6O95503 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC16.73■□□□□ 0.27
CBX6O95503 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
CBX6O95503 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
CBX6O95503 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CBX6O95503 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC16.73■□□□□ 0.27
CBX6O95503 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CBX6O95503 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC16.73■□□□□ 0.27
CBX6O95503 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC16.73■□□□□ 0.27
CBX6O95503 BID-213ENST00000615414 2236 ntTSL 5 BASIC16.73■□□□□ 0.27
CBX6O95503 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CBX6O95503 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CBX6O95503 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CBX6O95503 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
CBX6O95503 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CBX6O95503 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC16.73■□□□□ 0.27
CBX6O95503 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
CBX6O95503 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC16.73■□□□□ 0.27
CBX6O95503 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CBX6O95503 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC16.73■□□□□ 0.27
CBX6O95503 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CBX6O95503 EGFEM1P-202ENST00000431685 1563 ntBASIC16.72■□□□□ 0.27
CBX6O95503 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC16.72■□□□□ 0.27
CBX6O95503 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC16.72■□□□□ 0.27
CBX6O95503 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CBX6O95503 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
CBX6O95503 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CBX6O95503 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CBX6O95503 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
CBX6O95503 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CBX6O95503 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
CBX6O95503 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CBX6O95503 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
CBX6O95503 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
CBX6O95503 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
CBX6O95503 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CBX6O95503 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
CBX6O95503 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
CBX6O95503 IGHV3-47-201ENST00000425060 335 ntBASIC16.72■□□□□ 0.27
CBX6O95503 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC16.72■□□□□ 0.27
CBX6O95503 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC16.72■□□□□ 0.27
CBX6O95503 AC112698.1-201ENST00000510299 916 ntBASIC16.72■□□□□ 0.27
CBX6O95503 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
CBX6O95503 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC16.72■□□□□ 0.27
CBX6O95503 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC16.72■□□□□ 0.27
CBX6O95503 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
CBX6O95503 NME4-212ENST00000621774 904 ntTSL 3 BASIC16.72■□□□□ 0.27
CBX6O95503 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CBX6O95503 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CBX6O95503 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CBX6O95503 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC16.72■□□□□ 0.27
CBX6O95503 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CBX6O95503 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CBX6O95503 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC16.72■□□□□ 0.27
CBX6O95503 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
CBX6O95503 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC16.72■□□□□ 0.27
CBX6O95503 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms