Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
BEST1O76090 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
BEST1O76090 GOLGA6L17P-202ENST00000614358 1398 ntBASIC17.49■□□□□ 0.39
BEST1O76090 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
BEST1O76090 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC17.49■□□□□ 0.39
BEST1O76090 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
BEST1O76090 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
BEST1O76090 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
BEST1O76090 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
BEST1O76090 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC17.48■□□□□ 0.39
BEST1O76090 GPAA1P2-202ENST00000606848 1787 ntBASIC17.48■□□□□ 0.39
BEST1O76090 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
BEST1O76090 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
BEST1O76090 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
BEST1O76090 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
BEST1O76090 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC17.48■□□□□ 0.39
BEST1O76090 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
BEST1O76090 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC17.48■□□□□ 0.39
BEST1O76090 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
BEST1O76090 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC17.48■□□□□ 0.39
BEST1O76090 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
BEST1O76090 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
BEST1O76090 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
BEST1O76090 AL627223.1-201ENST00000416693 442 ntBASIC17.48■□□□□ 0.39
BEST1O76090 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
BEST1O76090 HLA-J-202ENST00000469281 1241 ntBASIC17.48■□□□□ 0.39
BEST1O76090 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC17.48■□□□□ 0.39
BEST1O76090 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC17.48■□□□□ 0.39
BEST1O76090 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC17.48■□□□□ 0.39
BEST1O76090 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
BEST1O76090 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
BEST1O76090 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
BEST1O76090 AC009053.2-201ENST00000563701 2365 ntBASIC17.48■□□□□ 0.39
BEST1O76090 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
BEST1O76090 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
BEST1O76090 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
BEST1O76090 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
BEST1O76090 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.48■□□□□ 0.39
BEST1O76090 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
BEST1O76090 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
BEST1O76090 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
BEST1O76090 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
BEST1O76090 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
BEST1O76090 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC17.48■□□□□ 0.39
BEST1O76090 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
BEST1O76090 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC17.47■□□□□ 0.39
BEST1O76090 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
BEST1O76090 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
BEST1O76090 DPM2-202ENST00000373110 738 ntTSL 2 BASIC17.47■□□□□ 0.39
BEST1O76090 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC17.47■□□□□ 0.39
BEST1O76090 CBR1-202ENST00000399191 838 ntTSL 3 BASIC17.47■□□□□ 0.39
BEST1O76090 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC17.47■□□□□ 0.39
BEST1O76090 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
BEST1O76090 KRT18P34-201ENST00000488218 1270 ntBASIC17.47■□□□□ 0.39
BEST1O76090 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC17.47■□□□□ 0.39
BEST1O76090 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC17.47■□□□□ 0.39
BEST1O76090 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC17.47■□□□□ 0.39
BEST1O76090 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC17.47■□□□□ 0.39
BEST1O76090 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
BEST1O76090 SSH2-211ENST00000590153 570 ntTSL 4 BASIC17.47■□□□□ 0.39
BEST1O76090 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
BEST1O76090 RPS15-207ENST00000591032 550 ntTSL 3 BASIC17.47■□□□□ 0.39
BEST1O76090 AC027307.2-201ENST00000591252 911 ntBASIC17.47■□□□□ 0.39
BEST1O76090 RPS15-212ENST00000593052 629 ntTSL 2 BASIC17.47■□□□□ 0.39
BEST1O76090 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
BEST1O76090 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
BEST1O76090 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC17.47■□□□□ 0.39
BEST1O76090 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC17.47■□□□□ 0.39
BEST1O76090 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC17.47■□□□□ 0.39
BEST1O76090 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
BEST1O76090 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC17.47■□□□□ 0.39
BEST1O76090 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
BEST1O76090 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
BEST1O76090 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
BEST1O76090 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
BEST1O76090 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC17.47■□□□□ 0.39
BEST1O76090 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
BEST1O76090 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
BEST1O76090 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
BEST1O76090 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC17.46■□□□□ 0.39
BEST1O76090 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
BEST1O76090 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
BEST1O76090 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
BEST1O76090 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
BEST1O76090 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
BEST1O76090 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
BEST1O76090 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
BEST1O76090 GGCT-205ENST00000409436 954 ntTSL 3 BASIC17.46■□□□□ 0.39
BEST1O76090 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC17.46■□□□□ 0.39
BEST1O76090 AC005237.2-201ENST00000434368 219 ntBASIC17.46■□□□□ 0.39
BEST1O76090 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC17.46■□□□□ 0.39
BEST1O76090 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
BEST1O76090 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
BEST1O76090 AC008267.7-201ENST00000624570 1194 ntBASIC17.46■□□□□ 0.39
BEST1O76090 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC17.46■□□□□ 0.39
BEST1O76090 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
BEST1O76090 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
BEST1O76090 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
BEST1O76090 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
BEST1O76090 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC17.46■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms