Protein–RNA interactions for Protein: O75486

SUPT3H, Transcription initiation protein SPT3 homolog, humanhuman

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT3HO75486 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
SUPT3HO75486 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SUPT3HO75486 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SUPT3HO75486 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
SUPT3HO75486 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC16.66■□□□□ 0.26
SUPT3HO75486 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SUPT3HO75486 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SUPT3HO75486 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC16.66■□□□□ 0.26
SUPT3HO75486 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SUPT3HO75486 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SUPT3HO75486 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SUPT3HO75486 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC16.66■□□□□ 0.26
SUPT3HO75486 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC16.66■□□□□ 0.26
SUPT3HO75486 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
SUPT3HO75486 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC16.66■□□□□ 0.26
SUPT3HO75486 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
SUPT3HO75486 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC16.65■□□□□ 0.26
SUPT3HO75486 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC16.65■□□□□ 0.26
SUPT3HO75486 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
SUPT3HO75486 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
SUPT3HO75486 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC16.65■□□□□ 0.26
SUPT3HO75486 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC16.65■□□□□ 0.26
SUPT3HO75486 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC16.65■□□□□ 0.26
SUPT3HO75486 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SUPT3HO75486 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SUPT3HO75486 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SUPT3HO75486 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
SUPT3HO75486 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SUPT3HO75486 RBM17P3-201ENST00000417687 1192 ntBASIC16.65■□□□□ 0.26
SUPT3HO75486 PRYP5-201ENST00000451909 266 ntBASIC16.65■□□□□ 0.26
SUPT3HO75486 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SUPT3HO75486 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC16.65■□□□□ 0.26
SUPT3HO75486 MTDHP3-201ENST00000594186 672 ntBASIC16.65■□□□□ 0.26
SUPT3HO75486 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SUPT3HO75486 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC16.65■□□□□ 0.26
SUPT3HO75486 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
SUPT3HO75486 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SUPT3HO75486 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC16.65■□□□□ 0.26
SUPT3HO75486 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SUPT3HO75486 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SUPT3HO75486 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC16.65■□□□□ 0.26
SUPT3HO75486 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
SUPT3HO75486 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SUPT3HO75486 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
SUPT3HO75486 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
SUPT3HO75486 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC16.64■□□□□ 0.26
SUPT3HO75486 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SUPT3HO75486 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC16.64■□□□□ 0.25
SUPT3HO75486 C1R-202ENST00000536053 2347 ntTSL 2 BASIC16.64■□□□□ 0.25
SUPT3HO75486 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC16.64■□□□□ 0.25
SUPT3HO75486 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SUPT3HO75486 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC16.64■□□□□ 0.25
SUPT3HO75486 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SUPT3HO75486 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SUPT3HO75486 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SUPT3HO75486 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SUPT3HO75486 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC16.64■□□□□ 0.25
SUPT3HO75486 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
SUPT3HO75486 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SUPT3HO75486 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC16.64■□□□□ 0.25
SUPT3HO75486 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
SUPT3HO75486 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SUPT3HO75486 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC16.64■□□□□ 0.25
SUPT3HO75486 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC16.64■□□□□ 0.25
SUPT3HO75486 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC16.64■□□□□ 0.25
SUPT3HO75486 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SUPT3HO75486 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC16.64■□□□□ 0.25
SUPT3HO75486 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SUPT3HO75486 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC16.64■□□□□ 0.25
SUPT3HO75486 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC16.64■□□□□ 0.25
SUPT3HO75486 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC16.64■□□□□ 0.25
SUPT3HO75486 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
SUPT3HO75486 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SUPT3HO75486 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
SUPT3HO75486 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
SUPT3HO75486 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SUPT3HO75486 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC16.64■□□□□ 0.25
SUPT3HO75486 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
SUPT3HO75486 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SUPT3HO75486 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
SUPT3HO75486 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC16.63■□□□□ 0.25
SUPT3HO75486 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC16.63■□□□□ 0.25
SUPT3HO75486 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SUPT3HO75486 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC16.63■□□□□ 0.25
SUPT3HO75486 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SUPT3HO75486 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
SUPT3HO75486 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
SUPT3HO75486 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
SUPT3HO75486 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SUPT3HO75486 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC16.63■□□□□ 0.25
SUPT3HO75486 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC16.63■□□□□ 0.25
SUPT3HO75486 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SUPT3HO75486 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SUPT3HO75486 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC16.63■□□□□ 0.25
SUPT3HO75486 LSM5-204ENST00000409909 740 ntTSL 2 BASIC16.63■□□□□ 0.25
SUPT3HO75486 TERC-201ENST00000602385 541 ntBASIC16.63■□□□□ 0.25
SUPT3HO75486 AL121772.3-201ENST00000610840 674 ntBASIC16.63■□□□□ 0.25
SUPT3HO75486 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
SUPT3HO75486 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SUPT3HO75486 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms