Protein–RNA interactions for Protein: O60813

PRAMEF11, PRAME family member 11, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF11O60813 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PRAMEF11O60813 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PRAMEF11O60813 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC16.91■□□□□ 0.3
PRAMEF11O60813 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
PRAMEF11O60813 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
PRAMEF11O60813 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC16.91■□□□□ 0.3
PRAMEF11O60813 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PRAMEF11O60813 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC16.91■□□□□ 0.3
PRAMEF11O60813 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
PRAMEF11O60813 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PRAMEF11O60813 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PRAMEF11O60813 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PRAMEF11O60813 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PRAMEF11O60813 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PRAMEF11O60813 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PRAMEF11O60813 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
PRAMEF11O60813 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PRAMEF11O60813 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
PRAMEF11O60813 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
PRAMEF11O60813 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC16.9■□□□□ 0.3
PRAMEF11O60813 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
PRAMEF11O60813 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
PRAMEF11O60813 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
PRAMEF11O60813 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PRAMEF11O60813 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC16.9■□□□□ 0.3
PRAMEF11O60813 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC16.9■□□□□ 0.3
PRAMEF11O60813 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
PRAMEF11O60813 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
PRAMEF11O60813 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC16.9■□□□□ 0.3
PRAMEF11O60813 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PRAMEF11O60813 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
PRAMEF11O60813 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC16.9■□□□□ 0.3
PRAMEF11O60813 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
PRAMEF11O60813 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PRAMEF11O60813 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PRAMEF11O60813 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
PRAMEF11O60813 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PRAMEF11O60813 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC16.9■□□□□ 0.3
PRAMEF11O60813 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC16.9■□□□□ 0.3
PRAMEF11O60813 CFL1-202ENST00000524553 860 ntTSL 2 BASIC16.9■□□□□ 0.3
PRAMEF11O60813 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC16.9■□□□□ 0.3
PRAMEF11O60813 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
PRAMEF11O60813 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC16.9■□□□□ 0.3
PRAMEF11O60813 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PRAMEF11O60813 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC16.9■□□□□ 0.3
PRAMEF11O60813 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC16.9■□□□□ 0.3
PRAMEF11O60813 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PRAMEF11O60813 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
PRAMEF11O60813 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PRAMEF11O60813 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
PRAMEF11O60813 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
PRAMEF11O60813 AKAP8P1-201ENST00000434743 1349 ntBASIC16.9■□□□□ 0.3
PRAMEF11O60813 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PRAMEF11O60813 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
PRAMEF11O60813 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
PRAMEF11O60813 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC16.9■□□□□ 0.3
PRAMEF11O60813 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PRAMEF11O60813 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PRAMEF11O60813 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC16.89■□□□□ 0.3
PRAMEF11O60813 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.3
PRAMEF11O60813 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PRAMEF11O60813 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PRAMEF11O60813 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
PRAMEF11O60813 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
PRAMEF11O60813 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PRAMEF11O60813 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC16.89■□□□□ 0.29
PRAMEF11O60813 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PRAMEF11O60813 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC16.89■□□□□ 0.29
PRAMEF11O60813 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PRAMEF11O60813 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC16.89■□□□□ 0.29
PRAMEF11O60813 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC16.89■□□□□ 0.29
PRAMEF11O60813 CEND1P1-201ENST00000451006 455 ntBASIC16.89■□□□□ 0.29
PRAMEF11O60813 KRT18P34-201ENST00000488218 1270 ntBASIC16.89■□□□□ 0.29
PRAMEF11O60813 FAM86C2P-203ENST00000528684 1004 ntBASIC16.89■□□□□ 0.29
PRAMEF11O60813 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC16.89■□□□□ 0.29
PRAMEF11O60813 MIR4469-201ENST00000583919 79 ntBASIC16.89■□□□□ 0.29
PRAMEF11O60813 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
PRAMEF11O60813 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
PRAMEF11O60813 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC16.89■□□□□ 0.29
PRAMEF11O60813 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
PRAMEF11O60813 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PRAMEF11O60813 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
PRAMEF11O60813 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PRAMEF11O60813 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
PRAMEF11O60813 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PRAMEF11O60813 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PRAMEF11O60813 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
PRAMEF11O60813 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
PRAMEF11O60813 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
PRAMEF11O60813 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC16.89■□□□□ 0.29
PRAMEF11O60813 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
PRAMEF11O60813 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PRAMEF11O60813 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PRAMEF11O60813 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
PRAMEF11O60813 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PRAMEF11O60813 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PRAMEF11O60813 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PRAMEF11O60813 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PRAMEF11O60813 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC16.88■□□□□ 0.29
PRAMEF11O60813 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms