Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC26.46■■□□□ 1.83
CHD1O14646 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
CHD1O14646 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC26.46■■□□□ 1.83
CHD1O14646 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
CHD1O14646 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC26.46■■□□□ 1.83
CHD1O14646 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC26.46■■□□□ 1.83
CHD1O14646 AC133963.1-201ENST00000504166 1679 ntBASIC26.45■■□□□ 1.83
CHD1O14646 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.83
CHD1O14646 AKR7A2P1-201ENST00000460134 915 ntBASIC26.45■■□□□ 1.83
CHD1O14646 IMP3P2-201ENST00000489760 475 ntBASIC26.45■■□□□ 1.83
CHD1O14646 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC26.45■■□□□ 1.83
CHD1O14646 HNRNPUP1-201ENST00000554987 333 ntBASIC26.45■■□□□ 1.83
CHD1O14646 AP006547.1-201ENST00000563435 692 ntBASIC26.45■■□□□ 1.83
CHD1O14646 FAAP24-204ENST00000590179 784 ntTSL 2 BASIC26.45■■□□□ 1.83
CHD1O14646 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC26.45■■□□□ 1.83
CHD1O14646 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.83
CHD1O14646 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
CHD1O14646 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
CHD1O14646 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC26.45■■□□□ 1.82
CHD1O14646 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC26.45■■□□□ 1.82
CHD1O14646 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
CHD1O14646 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
CHD1O14646 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
CHD1O14646 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC26.45■■□□□ 1.82
CHD1O14646 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC26.45■■□□□ 1.82
CHD1O14646 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
CHD1O14646 AL662890.1-201ENST00000396818 632 ntBASIC26.45■■□□□ 1.82
CHD1O14646 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
CHD1O14646 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC26.45■■□□□ 1.82
CHD1O14646 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC26.45■■□□□ 1.82
CHD1O14646 AL591846.1-201ENST00000451736 433 ntBASIC26.45■■□□□ 1.82
CHD1O14646 AC138627.1-207ENST00000641560 1006 ntBASIC26.45■■□□□ 1.82
CHD1O14646 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
CHD1O14646 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC26.45■■□□□ 1.82
CHD1O14646 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC26.44■■□□□ 1.82
CHD1O14646 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
CHD1O14646 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
CHD1O14646 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC26.44■■□□□ 1.82
CHD1O14646 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
CHD1O14646 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC26.44■■□□□ 1.82
CHD1O14646 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC26.44■■□□□ 1.82
CHD1O14646 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC26.44■■□□□ 1.82
CHD1O14646 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
CHD1O14646 AZGP1P1-201ENST00000411909 902 ntBASIC26.44■■□□□ 1.82
CHD1O14646 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC26.44■■□□□ 1.82
CHD1O14646 PTPA-217ENST00000434095 870 ntTSL 2 BASIC26.44■■□□□ 1.82
CHD1O14646 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC26.44■■□□□ 1.82
CHD1O14646 RPL8-205ENST00000527914 551 ntTSL 3 BASIC26.44■■□□□ 1.82
CHD1O14646 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
CHD1O14646 CLUHP6-201ENST00000580789 941 ntBASIC26.44■■□□□ 1.82
CHD1O14646 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC26.44■■□□□ 1.82
CHD1O14646 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC26.44■■□□□ 1.82
CHD1O14646 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC26.44■■□□□ 1.82
CHD1O14646 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
CHD1O14646 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC26.44■■□□□ 1.82
CHD1O14646 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC26.44■■□□□ 1.82
CHD1O14646 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
CHD1O14646 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
CHD1O14646 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
CHD1O14646 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC26.43■■□□□ 1.82
CHD1O14646 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
CHD1O14646 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC26.43■■□□□ 1.82
CHD1O14646 EEF1DP4-201ENST00000446006 880 ntBASIC26.43■■□□□ 1.82
CHD1O14646 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC26.43■■□□□ 1.82
CHD1O14646 AC025154.2-203ENST00000550214 1031 ntTSL 2 BASIC26.43■■□□□ 1.82
CHD1O14646 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC26.43■■□□□ 1.82
CHD1O14646 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC26.43■■□□□ 1.82
CHD1O14646 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC26.43■■□□□ 1.82
CHD1O14646 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
CHD1O14646 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
CHD1O14646 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC26.43■■□□□ 1.82
CHD1O14646 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC26.43■■□□□ 1.82
CHD1O14646 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
CHD1O14646 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC26.43■■□□□ 1.82
CHD1O14646 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC26.43■■□□□ 1.82
CHD1O14646 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC26.43■■□□□ 1.82
CHD1O14646 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
CHD1O14646 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC26.43■■□□□ 1.82
CHD1O14646 LBH-202ENST00000401506 485 ntTSL 3 BASIC26.42■■□□□ 1.82
CHD1O14646 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC26.42■■□□□ 1.82
CHD1O14646 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC26.42■■□□□ 1.82
CHD1O14646 HNRNPA1P48-202ENST00000565308 961 ntBASIC26.42■■□□□ 1.82
CHD1O14646 MIR3619-201ENST00000579667 83 ntBASIC26.42■■□□□ 1.82
CHD1O14646 AC026740.1-201ENST00000607068 791 ntBASIC26.42■■□□□ 1.82
CHD1O14646 AC091812.3-201ENST00000621362 345 ntBASIC26.42■■□□□ 1.82
CHD1O14646 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
CHD1O14646 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC26.42■■□□□ 1.82
CHD1O14646 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC26.42■■□□□ 1.82
CHD1O14646 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC26.42■■□□□ 1.82
CHD1O14646 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
CHD1O14646 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
CHD1O14646 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC26.42■■□□□ 1.82
CHD1O14646 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
CHD1O14646 RNASE10-201ENST00000328444 717 ntAPPRIS P1 BASIC26.42■■□□□ 1.82
CHD1O14646 PKIG-203ENST00000372887 769 ntTSL 3 BASIC26.42■■□□□ 1.82
CHD1O14646 RPL17P11-201ENST00000417593 544 ntBASIC26.42■■□□□ 1.82
CHD1O14646 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
CHD1O14646 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC26.42■■□□□ 1.82
CHD1O14646 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC26.42■■□□□ 1.82
CHD1O14646 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC26.42■■□□□ 1.82
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms