Protein–RNA interactions for Protein: O00206

TLR4, Toll-like receptor 4, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR4O00206 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
TLR4O00206 SLC25A39P2-201ENST00000537614 270 ntBASIC16.55■□□□□ 0.24
TLR4O00206 BAD-207ENST00000544785 525 ntTSL 3 BASIC16.55■□□□□ 0.24
TLR4O00206 AC140878.1-201ENST00000565277 250 ntBASIC16.55■□□□□ 0.24
TLR4O00206 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
TLR4O00206 SSH2-211ENST00000590153 570 ntTSL 4 BASIC16.55■□□□□ 0.24
TLR4O00206 AC027307.2-201ENST00000591252 911 ntBASIC16.55■□□□□ 0.24
TLR4O00206 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TLR4O00206 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
TLR4O00206 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC16.55■□□□□ 0.24
TLR4O00206 HARS-204ENST00000438307 1789 ntTSL 2 BASIC16.55■□□□□ 0.24
TLR4O00206 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TLR4O00206 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
TLR4O00206 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC16.55■□□□□ 0.24
TLR4O00206 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TLR4O00206 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TLR4O00206 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TLR4O00206 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TLR4O00206 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC16.55■□□□□ 0.24
TLR4O00206 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
TLR4O00206 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TLR4O00206 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
TLR4O00206 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TLR4O00206 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
TLR4O00206 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TLR4O00206 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
TLR4O00206 TPR-209ENST00000613151 2478 ntTSL 5 BASIC16.54■□□□□ 0.24
TLR4O00206 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TLR4O00206 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TLR4O00206 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
TLR4O00206 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TLR4O00206 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TLR4O00206 VMA21-202ENST00000370361 693 ntTSL 5 BASIC16.54■□□□□ 0.24
TLR4O00206 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TLR4O00206 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
TLR4O00206 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC16.54■□□□□ 0.24
TLR4O00206 SLC25A1P3-201ENST00000395415 828 ntBASIC16.54■□□□□ 0.24
TLR4O00206 WRB-204ENST00000398753 699 ntTSL 3 BASIC16.54■□□□□ 0.24
TLR4O00206 CENPM-205ENST00000404067 905 ntTSL 3 BASIC16.54■□□□□ 0.24
TLR4O00206 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TLR4O00206 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC16.54■□□□□ 0.24
TLR4O00206 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC16.54■□□□□ 0.24
TLR4O00206 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
TLR4O00206 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
TLR4O00206 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
TLR4O00206 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC16.54■□□□□ 0.24
TLR4O00206 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC16.54■□□□□ 0.24
TLR4O00206 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC16.54■□□□□ 0.24
TLR4O00206 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC16.54■□□□□ 0.24
TLR4O00206 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
TLR4O00206 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
TLR4O00206 AC084018.2-201ENST00000613093 2607 ntBASIC16.54■□□□□ 0.24
TLR4O00206 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC16.54■□□□□ 0.24
TLR4O00206 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TLR4O00206 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC16.54■□□□□ 0.24
TLR4O00206 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
TLR4O00206 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TLR4O00206 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TLR4O00206 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TLR4O00206 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TLR4O00206 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC16.53■□□□□ 0.24
TLR4O00206 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
TLR4O00206 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TLR4O00206 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TLR4O00206 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TLR4O00206 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TLR4O00206 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TLR4O00206 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TLR4O00206 MIR346-201ENST00000362234 95 ntBASIC16.53■□□□□ 0.24
TLR4O00206 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC16.53■□□□□ 0.24
TLR4O00206 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
TLR4O00206 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TLR4O00206 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
TLR4O00206 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC16.53■□□□□ 0.24
TLR4O00206 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC16.53■□□□□ 0.24
TLR4O00206 GATD1-206ENST00000526325 756 ntTSL 5 BASIC16.53■□□□□ 0.24
TLR4O00206 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC16.53■□□□□ 0.24
TLR4O00206 ALG1L8P-201ENST00000533887 760 ntBASIC16.53■□□□□ 0.24
TLR4O00206 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC16.53■□□□□ 0.24
TLR4O00206 AP000842.3-202ENST00000569238 1080 ntBASIC16.53■□□□□ 0.24
TLR4O00206 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC16.53■□□□□ 0.24
TLR4O00206 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TLR4O00206 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TLR4O00206 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC16.53■□□□□ 0.24
TLR4O00206 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC16.53■□□□□ 0.24
TLR4O00206 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TLR4O00206 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TLR4O00206 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC16.53■□□□□ 0.24
TLR4O00206 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TLR4O00206 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TLR4O00206 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TLR4O00206 KRT8P49-201ENST00000604166 1432 ntBASIC16.53■□□□□ 0.24
TLR4O00206 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TLR4O00206 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TLR4O00206 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
TLR4O00206 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
TLR4O00206 FO538757.1-201ENST00000623083 1397 ntBASIC16.52■□□□□ 0.24
TLR4O00206 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC16.52■□□□□ 0.24
TLR4O00206 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
TLR4O00206 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC16.52■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms