Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC15.24■□□□□ 0.03
NPIPA2E9PIF3 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC15.24■□□□□ 0.03
NPIPA2E9PIF3 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC15.24■□□□□ 0.03
NPIPA2E9PIF3 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC15.24■□□□□ 0.03
NPIPA2E9PIF3 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
NPIPA2E9PIF3 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
NPIPA2E9PIF3 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
NPIPA2E9PIF3 FRMD8P1-201ENST00000440433 1524 ntBASIC15.24■□□□□ 0.03
NPIPA2E9PIF3 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NPIPA2E9PIF3 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NPIPA2E9PIF3 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
NPIPA2E9PIF3 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NPIPA2E9PIF3 PNMT-202ENST00000394246 821 ntTSL 2 BASIC15.24■□□□□ 0.03
NPIPA2E9PIF3 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC15.24■□□□□ 0.03
NPIPA2E9PIF3 AL671277.1-201ENST00000429656 993 ntBASIC15.24■□□□□ 0.03
NPIPA2E9PIF3 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
NPIPA2E9PIF3 CYMP-203ENST00000474680 1263 ntBASIC15.24■□□□□ 0.03
NPIPA2E9PIF3 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC15.24■□□□□ 0.03
NPIPA2E9PIF3 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC15.24■□□□□ 0.03
NPIPA2E9PIF3 BSG-214ENST00000614867 960 ntTSL 3 BASIC15.24■□□□□ 0.03
NPIPA2E9PIF3 AC093028.1-201ENST00000622998 982 ntBASIC15.24■□□□□ 0.03
NPIPA2E9PIF3 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC15.24■□□□□ 0.03
NPIPA2E9PIF3 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
NPIPA2E9PIF3 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NPIPA2E9PIF3 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NPIPA2E9PIF3 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
NPIPA2E9PIF3 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
NPIPA2E9PIF3 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC15.24■□□□□ 0.03
NPIPA2E9PIF3 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NPIPA2E9PIF3 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
NPIPA2E9PIF3 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
NPIPA2E9PIF3 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
NPIPA2E9PIF3 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC15.24■□□□□ 0.03
NPIPA2E9PIF3 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
NPIPA2E9PIF3 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
NPIPA2E9PIF3 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NPIPA2E9PIF3 AC060834.1-201ENST00000443027 2032 ntBASIC15.24■□□□□ 0.03
NPIPA2E9PIF3 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NPIPA2E9PIF3 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
NPIPA2E9PIF3 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
NPIPA2E9PIF3 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
NPIPA2E9PIF3 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
NPIPA2E9PIF3 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NPIPA2E9PIF3 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
NPIPA2E9PIF3 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NPIPA2E9PIF3 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
NPIPA2E9PIF3 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC15.23■□□□□ 0.03
NPIPA2E9PIF3 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC15.23■□□□□ 0.03
NPIPA2E9PIF3 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
NPIPA2E9PIF3 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
NPIPA2E9PIF3 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NPIPA2E9PIF3 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NPIPA2E9PIF3 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NPIPA2E9PIF3 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
NPIPA2E9PIF3 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
NPIPA2E9PIF3 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC15.23■□□□□ 0.03
NPIPA2E9PIF3 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC15.23■□□□□ 0.03
NPIPA2E9PIF3 AC140658.5-201ENST00000438532 169 ntBASIC15.23■□□□□ 0.03
NPIPA2E9PIF3 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC15.23■□□□□ 0.03
NPIPA2E9PIF3 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC15.23■□□□□ 0.03
NPIPA2E9PIF3 GATB-205ENST00000508611 605 ntTSL 2 BASIC15.23■□□□□ 0.03
NPIPA2E9PIF3 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC15.23■□□□□ 0.03
NPIPA2E9PIF3 MMP17-203ENST00000535004 719 ntTSL 3 BASIC15.23■□□□□ 0.03
NPIPA2E9PIF3 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
NPIPA2E9PIF3 AC022145.2-201ENST00000598203 171 ntBASIC15.23■□□□□ 0.03
NPIPA2E9PIF3 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
NPIPA2E9PIF3 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
NPIPA2E9PIF3 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
NPIPA2E9PIF3 AL121761.2-201ENST00000598007 1648 ntBASIC15.23■□□□□ 0.03
NPIPA2E9PIF3 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC15.23■□□□□ 0.03
NPIPA2E9PIF3 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
NPIPA2E9PIF3 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NPIPA2E9PIF3 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NPIPA2E9PIF3 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
NPIPA2E9PIF3 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
NPIPA2E9PIF3 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
NPIPA2E9PIF3 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC15.23■□□□□ 0.03
NPIPA2E9PIF3 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
NPIPA2E9PIF3 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NPIPA2E9PIF3 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC15.23■□□□□ 0.03
NPIPA2E9PIF3 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NPIPA2E9PIF3 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC15.23■□□□□ 0.03
NPIPA2E9PIF3 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
NPIPA2E9PIF3 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NPIPA2E9PIF3 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC15.23■□□□□ 0.03
NPIPA2E9PIF3 GOLGA6L17P-202ENST00000614358 1398 ntBASIC15.23■□□□□ 0.03
NPIPA2E9PIF3 AL021920.2-201ENST00000624828 1351 ntBASIC15.23■□□□□ 0.03
NPIPA2E9PIF3 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
NPIPA2E9PIF3 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC15.23■□□□□ 0.03
NPIPA2E9PIF3 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC15.22■□□□□ 0.03
NPIPA2E9PIF3 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC15.22■□□□□ 0.03
NPIPA2E9PIF3 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC15.22■□□□□ 0.03
NPIPA2E9PIF3 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
NPIPA2E9PIF3 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NPIPA2E9PIF3 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NPIPA2E9PIF3 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NPIPA2E9PIF3 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NPIPA2E9PIF3 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NPIPA2E9PIF3 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NPIPA2E9PIF3 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 67.7 ms