Protein–RNA interactions for Protein: A6NGZ8

SMIM9, Small integral membrane protein 9, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM9A6NGZ8 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
SMIM9A6NGZ8 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
SMIM9A6NGZ8 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SMIM9A6NGZ8 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC12.14□□□□□ -0.47
SMIM9A6NGZ8 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC12.14□□□□□ -0.47
SMIM9A6NGZ8 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
SMIM9A6NGZ8 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
SMIM9A6NGZ8 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SMIM9A6NGZ8 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
SMIM9A6NGZ8 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC12.14□□□□□ -0.47
SMIM9A6NGZ8 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
SMIM9A6NGZ8 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SMIM9A6NGZ8 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
SMIM9A6NGZ8 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SMIM9A6NGZ8 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
SMIM9A6NGZ8 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SMIM9A6NGZ8 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC12.14□□□□□ -0.47
SMIM9A6NGZ8 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC12.13□□□□□ -0.47
SMIM9A6NGZ8 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SMIM9A6NGZ8 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SMIM9A6NGZ8 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
SMIM9A6NGZ8 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SMIM9A6NGZ8 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC12.13□□□□□ -0.47
SMIM9A6NGZ8 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
SMIM9A6NGZ8 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
SMIM9A6NGZ8 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC12.13□□□□□ -0.47
SMIM9A6NGZ8 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
SMIM9A6NGZ8 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SMIM9A6NGZ8 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
SMIM9A6NGZ8 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
SMIM9A6NGZ8 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC12.13□□□□□ -0.47
SMIM9A6NGZ8 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
SMIM9A6NGZ8 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
SMIM9A6NGZ8 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SMIM9A6NGZ8 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
SMIM9A6NGZ8 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
SMIM9A6NGZ8 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SMIM9A6NGZ8 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC12.13□□□□□ -0.47
SMIM9A6NGZ8 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SMIM9A6NGZ8 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC12.13□□□□□ -0.47
SMIM9A6NGZ8 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SMIM9A6NGZ8 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SMIM9A6NGZ8 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
SMIM9A6NGZ8 NEK7-201ENST00000367383 586 ntTSL 2 BASIC12.13□□□□□ -0.47
SMIM9A6NGZ8 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC12.13□□□□□ -0.47
SMIM9A6NGZ8 AC002056.1-201ENST00000395613 760 ntBASIC12.13□□□□□ -0.47
SMIM9A6NGZ8 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC12.13□□□□□ -0.47
SMIM9A6NGZ8 COX10-202ENST00000429152 875 ntTSL 2 BASIC12.13□□□□□ -0.47
SMIM9A6NGZ8 AP000347.1-202ENST00000435868 847 ntBASIC12.13□□□□□ -0.47
SMIM9A6NGZ8 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC12.13□□□□□ -0.47
SMIM9A6NGZ8 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC12.13□□□□□ -0.47
SMIM9A6NGZ8 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
SMIM9A6NGZ8 PGAM5P1-201ENST00000518923 814 ntBASIC12.13□□□□□ -0.47
SMIM9A6NGZ8 AC112191.1-201ENST00000523689 701 ntBASIC12.13□□□□□ -0.47
SMIM9A6NGZ8 RPL28-209ENST00000560055 670 ntTSL 3 BASIC12.13□□□□□ -0.47
SMIM9A6NGZ8 AC018845.2-201ENST00000568326 409 ntBASIC12.13□□□□□ -0.47
SMIM9A6NGZ8 MIR3687-2-201ENST00000577708 61 ntBASIC12.13□□□□□ -0.47
SMIM9A6NGZ8 CYP2A7P1-201ENST00000595391 815 ntBASIC12.13□□□□□ -0.47
SMIM9A6NGZ8 AC068137.2-201ENST00000605408 478 ntBASIC12.13□□□□□ -0.47
SMIM9A6NGZ8 AC021097.1-201ENST00000607902 574 ntBASIC12.13□□□□□ -0.47
SMIM9A6NGZ8 MIR3687-1-201ENST00000614492 61 ntBASIC12.13□□□□□ -0.47
SMIM9A6NGZ8 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
SMIM9A6NGZ8 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC12.13□□□□□ -0.47
SMIM9A6NGZ8 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
SMIM9A6NGZ8 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
SMIM9A6NGZ8 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC12.13□□□□□ -0.47
SMIM9A6NGZ8 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SMIM9A6NGZ8 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC12.13□□□□□ -0.47
SMIM9A6NGZ8 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SMIM9A6NGZ8 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC12.13□□□□□ -0.47
SMIM9A6NGZ8 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC12.13□□□□□ -0.47
SMIM9A6NGZ8 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SMIM9A6NGZ8 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SMIM9A6NGZ8 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
SMIM9A6NGZ8 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SMIM9A6NGZ8 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC12.13□□□□□ -0.47
SMIM9A6NGZ8 AC092068.3-201ENST00000587894 2016 ntBASIC12.13□□□□□ -0.47
SMIM9A6NGZ8 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
SMIM9A6NGZ8 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC12.13□□□□□ -0.47
SMIM9A6NGZ8 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SMIM9A6NGZ8 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SMIM9A6NGZ8 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
SMIM9A6NGZ8 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SMIM9A6NGZ8 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
SMIM9A6NGZ8 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
SMIM9A6NGZ8 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SMIM9A6NGZ8 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
SMIM9A6NGZ8 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
SMIM9A6NGZ8 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SMIM9A6NGZ8 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC12.12□□□□□ -0.47
SMIM9A6NGZ8 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC12.12□□□□□ -0.47
SMIM9A6NGZ8 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SMIM9A6NGZ8 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SMIM9A6NGZ8 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SMIM9A6NGZ8 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
SMIM9A6NGZ8 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SMIM9A6NGZ8 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC12.12□□□□□ -0.47
SMIM9A6NGZ8 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SMIM9A6NGZ8 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
SMIM9A6NGZ8 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms