Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TCRBV4S1A1TA0A5B7 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC13.49□□□□□ -0.25
TCRBV4S1A1TA0A5B7 STX3-203ENST00000529177 1571 ntTSL 2 BASIC13.49□□□□□ -0.25
TCRBV4S1A1TA0A5B7 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
TCRBV4S1A1TA0A5B7 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC13.49□□□□□ -0.25
TCRBV4S1A1TA0A5B7 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
TCRBV4S1A1TA0A5B7 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
TCRBV4S1A1TA0A5B7 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
TCRBV4S1A1TA0A5B7 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TCRBV4S1A1TA0A5B7 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TCRBV4S1A1TA0A5B7 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
TCRBV4S1A1TA0A5B7 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
TCRBV4S1A1TA0A5B7 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TCRBV4S1A1TA0A5B7 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
TCRBV4S1A1TA0A5B7 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC13.49□□□□□ -0.25
TCRBV4S1A1TA0A5B7 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TCRBV4S1A1TA0A5B7 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
TCRBV4S1A1TA0A5B7 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TCRBV4S1A1TA0A5B7 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
TCRBV4S1A1TA0A5B7 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TCRBV4S1A1TA0A5B7 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC13.49□□□□□ -0.25
TCRBV4S1A1TA0A5B7 PMP22-202ENST00000395936 816 ntTSL 3 BASIC13.49□□□□□ -0.25
TCRBV4S1A1TA0A5B7 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
TCRBV4S1A1TA0A5B7 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC13.49□□□□□ -0.25
TCRBV4S1A1TA0A5B7 UPF3AP3-201ENST00000420996 769 ntBASIC13.49□□□□□ -0.25
TCRBV4S1A1TA0A5B7 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC13.49□□□□□ -0.25
TCRBV4S1A1TA0A5B7 AC108073.2-201ENST00000464002 357 ntBASIC13.49□□□□□ -0.25
TCRBV4S1A1TA0A5B7 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
TCRBV4S1A1TA0A5B7 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC13.49□□□□□ -0.25
TCRBV4S1A1TA0A5B7 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC13.49□□□□□ -0.25
TCRBV4S1A1TA0A5B7 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC13.49□□□□□ -0.25
TCRBV4S1A1TA0A5B7 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC13.49□□□□□ -0.25
TCRBV4S1A1TA0A5B7 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC13.49□□□□□ -0.25
TCRBV4S1A1TA0A5B7 AC008667.4-201ENST00000607370 168 ntBASIC13.49□□□□□ -0.25
TCRBV4S1A1TA0A5B7 AL691403.2-201ENST00000618460 490 ntBASIC13.49□□□□□ -0.25
TCRBV4S1A1TA0A5B7 AC004790.2-201ENST00000623588 572 ntBASIC13.49□□□□□ -0.25
TCRBV4S1A1TA0A5B7 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
TCRBV4S1A1TA0A5B7 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TCRBV4S1A1TA0A5B7 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
TCRBV4S1A1TA0A5B7 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TCRBV4S1A1TA0A5B7 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC13.49□□□□□ -0.25
TCRBV4S1A1TA0A5B7 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TCRBV4S1A1TA0A5B7 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC13.49□□□□□ -0.25
TCRBV4S1A1TA0A5B7 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC13.49□□□□□ -0.25
TCRBV4S1A1TA0A5B7 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
TCRBV4S1A1TA0A5B7 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TCRBV4S1A1TA0A5B7 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
TCRBV4S1A1TA0A5B7 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
TCRBV4S1A1TA0A5B7 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
TCRBV4S1A1TA0A5B7 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TCRBV4S1A1TA0A5B7 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TCRBV4S1A1TA0A5B7 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
TCRBV4S1A1TA0A5B7 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC13.49□□□□□ -0.25
TCRBV4S1A1TA0A5B7 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
TCRBV4S1A1TA0A5B7 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
TCRBV4S1A1TA0A5B7 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC13.49□□□□□ -0.25
TCRBV4S1A1TA0A5B7 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC13.49□□□□□ -0.25
TCRBV4S1A1TA0A5B7 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
TCRBV4S1A1TA0A5B7 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
TCRBV4S1A1TA0A5B7 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
TCRBV4S1A1TA0A5B7 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
TCRBV4S1A1TA0A5B7 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC13.48□□□□□ -0.25
TCRBV4S1A1TA0A5B7 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TCRBV4S1A1TA0A5B7 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
TCRBV4S1A1TA0A5B7 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
TCRBV4S1A1TA0A5B7 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TCRBV4S1A1TA0A5B7 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
TCRBV4S1A1TA0A5B7 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC13.48□□□□□ -0.25
TCRBV4S1A1TA0A5B7 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
TCRBV4S1A1TA0A5B7 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
TCRBV4S1A1TA0A5B7 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
TCRBV4S1A1TA0A5B7 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC13.48□□□□□ -0.25
TCRBV4S1A1TA0A5B7 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TCRBV4S1A1TA0A5B7 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TCRBV4S1A1TA0A5B7 YBX2P1-201ENST00000394192 760 ntBASIC13.48□□□□□ -0.25
TCRBV4S1A1TA0A5B7 MRPL20P1-201ENST00000400819 433 ntBASIC13.48□□□□□ -0.25
TCRBV4S1A1TA0A5B7 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC13.48□□□□□ -0.25
TCRBV4S1A1TA0A5B7 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TCRBV4S1A1TA0A5B7 ATP6V0CP3-201ENST00000417255 467 ntBASIC13.48□□□□□ -0.25
TCRBV4S1A1TA0A5B7 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
TCRBV4S1A1TA0A5B7 VN2R19P-201ENST00000442399 1052 ntBASIC13.48□□□□□ -0.25
TCRBV4S1A1TA0A5B7 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC13.48□□□□□ -0.25
TCRBV4S1A1TA0A5B7 IGHV3-65-201ENST00000523210 341 ntBASIC13.48□□□□□ -0.25
TCRBV4S1A1TA0A5B7 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC13.48□□□□□ -0.25
TCRBV4S1A1TA0A5B7 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC13.48□□□□□ -0.25
TCRBV4S1A1TA0A5B7 MTDHP5-201ENST00000598980 586 ntBASIC13.48□□□□□ -0.25
TCRBV4S1A1TA0A5B7 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
TCRBV4S1A1TA0A5B7 GGTLC5P-201ENST00000617623 998 ntBASIC13.48□□□□□ -0.25
TCRBV4S1A1TA0A5B7 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC13.48□□□□□ -0.25
TCRBV4S1A1TA0A5B7 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TCRBV4S1A1TA0A5B7 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TCRBV4S1A1TA0A5B7 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC13.48□□□□□ -0.25
TCRBV4S1A1TA0A5B7 AC046158.3-201ENST00000624947 2558 ntBASIC13.48□□□□□ -0.25
TCRBV4S1A1TA0A5B7 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
TCRBV4S1A1TA0A5B7 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
TCRBV4S1A1TA0A5B7 GPR89P-201ENST00000407924 1495 ntBASIC13.48□□□□□ -0.25
TCRBV4S1A1TA0A5B7 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
TCRBV4S1A1TA0A5B7 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
TCRBV4S1A1TA0A5B7 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC13.48□□□□□ -0.25
TCRBV4S1A1TA0A5B7 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms