Protein–RNA interactions for Protein: A0A0C4DH59

TRBV5-4, T-cell receptor beta variable 5-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-4A0A0C4DH59 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRBV5-4A0A0C4DH59 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC16.38■□□□□ 0.21
TRBV5-4A0A0C4DH59 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRBV5-4A0A0C4DH59 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC16.38■□□□□ 0.21
TRBV5-4A0A0C4DH59 PCDHB19P-201ENST00000570871 2371 ntBASIC16.38■□□□□ 0.21
TRBV5-4A0A0C4DH59 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRBV5-4A0A0C4DH59 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TRBV5-4A0A0C4DH59 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC16.38■□□□□ 0.21
TRBV5-4A0A0C4DH59 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC16.38■□□□□ 0.21
TRBV5-4A0A0C4DH59 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC16.38■□□□□ 0.21
TRBV5-4A0A0C4DH59 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRBV5-4A0A0C4DH59 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
TRBV5-4A0A0C4DH59 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TRBV5-4A0A0C4DH59 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRBV5-4A0A0C4DH59 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRBV5-4A0A0C4DH59 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
TRBV5-4A0A0C4DH59 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
TRBV5-4A0A0C4DH59 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRBV5-4A0A0C4DH59 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRBV5-4A0A0C4DH59 COX10-202ENST00000429152 875 ntTSL 2 BASIC16.38■□□□□ 0.21
TRBV5-4A0A0C4DH59 MKNK2P1-201ENST00000437526 628 ntBASIC16.38■□□□□ 0.21
TRBV5-4A0A0C4DH59 KRT18P34-201ENST00000488218 1270 ntBASIC16.38■□□□□ 0.21
TRBV5-4A0A0C4DH59 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC16.38■□□□□ 0.21
TRBV5-4A0A0C4DH59 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC16.38■□□□□ 0.21
TRBV5-4A0A0C4DH59 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC16.38■□□□□ 0.21
TRBV5-4A0A0C4DH59 INO80E-210ENST00000567705 880 ntTSL 3 BASIC16.38■□□□□ 0.21
TRBV5-4A0A0C4DH59 IGHV3OR16-6-201ENST00000568775 360 ntBASIC16.38■□□□□ 0.21
TRBV5-4A0A0C4DH59 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
TRBV5-4A0A0C4DH59 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
TRBV5-4A0A0C4DH59 CITED2-204ENST00000618718 901 ntTSL 2 BASIC16.38■□□□□ 0.21
TRBV5-4A0A0C4DH59 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC16.38■□□□□ 0.21
TRBV5-4A0A0C4DH59 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRBV5-4A0A0C4DH59 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRBV5-4A0A0C4DH59 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC16.38■□□□□ 0.21
TRBV5-4A0A0C4DH59 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRBV5-4A0A0C4DH59 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC16.38■□□□□ 0.21
TRBV5-4A0A0C4DH59 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC16.38■□□□□ 0.21
TRBV5-4A0A0C4DH59 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRBV5-4A0A0C4DH59 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC16.37■□□□□ 0.21
TRBV5-4A0A0C4DH59 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRBV5-4A0A0C4DH59 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TRBV5-4A0A0C4DH59 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
TRBV5-4A0A0C4DH59 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TRBV5-4A0A0C4DH59 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRBV5-4A0A0C4DH59 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
TRBV5-4A0A0C4DH59 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC16.37■□□□□ 0.21
TRBV5-4A0A0C4DH59 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRBV5-4A0A0C4DH59 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC16.37■□□□□ 0.21
TRBV5-4A0A0C4DH59 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC16.37■□□□□ 0.21
TRBV5-4A0A0C4DH59 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TRBV5-4A0A0C4DH59 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRBV5-4A0A0C4DH59 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC16.37■□□□□ 0.21
TRBV5-4A0A0C4DH59 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRBV5-4A0A0C4DH59 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRBV5-4A0A0C4DH59 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRBV5-4A0A0C4DH59 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRBV5-4A0A0C4DH59 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TRBV5-4A0A0C4DH59 NEK7-201ENST00000367383 586 ntTSL 2 BASIC16.37■□□□□ 0.21
TRBV5-4A0A0C4DH59 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
TRBV5-4A0A0C4DH59 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRBV5-4A0A0C4DH59 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRBV5-4A0A0C4DH59 AL355306.1-201ENST00000415580 579 ntBASIC16.37■□□□□ 0.21
TRBV5-4A0A0C4DH59 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
TRBV5-4A0A0C4DH59 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC16.37■□□□□ 0.21
TRBV5-4A0A0C4DH59 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TRBV5-4A0A0C4DH59 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC16.37■□□□□ 0.21
TRBV5-4A0A0C4DH59 RARRES2P8-201ENST00000566335 367 ntBASIC16.37■□□□□ 0.21
TRBV5-4A0A0C4DH59 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRBV5-4A0A0C4DH59 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC16.37■□□□□ 0.21
TRBV5-4A0A0C4DH59 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC16.37■□□□□ 0.21
TRBV5-4A0A0C4DH59 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC16.37■□□□□ 0.21
TRBV5-4A0A0C4DH59 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC16.37■□□□□ 0.21
TRBV5-4A0A0C4DH59 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
TRBV5-4A0A0C4DH59 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
TRBV5-4A0A0C4DH59 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRBV5-4A0A0C4DH59 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
TRBV5-4A0A0C4DH59 AC006449.5-201ENST00000610658 2098 ntBASIC16.37■□□□□ 0.21
TRBV5-4A0A0C4DH59 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRBV5-4A0A0C4DH59 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
TRBV5-4A0A0C4DH59 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TRBV5-4A0A0C4DH59 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TRBV5-4A0A0C4DH59 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC16.37■□□□□ 0.21
TRBV5-4A0A0C4DH59 AKAP8P1-201ENST00000434743 1349 ntBASIC16.37■□□□□ 0.21
TRBV5-4A0A0C4DH59 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRBV5-4A0A0C4DH59 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRBV5-4A0A0C4DH59 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TRBV5-4A0A0C4DH59 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC16.37■□□□□ 0.21
TRBV5-4A0A0C4DH59 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC16.37■□□□□ 0.21
TRBV5-4A0A0C4DH59 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC16.37■□□□□ 0.21
TRBV5-4A0A0C4DH59 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC16.37■□□□□ 0.21
TRBV5-4A0A0C4DH59 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC16.37■□□□□ 0.21
TRBV5-4A0A0C4DH59 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC16.36■□□□□ 0.21
TRBV5-4A0A0C4DH59 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRBV5-4A0A0C4DH59 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TRBV5-4A0A0C4DH59 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
TRBV5-4A0A0C4DH59 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRBV5-4A0A0C4DH59 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRBV5-4A0A0C4DH59 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
TRBV5-4A0A0C4DH59 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRBV5-4A0A0C4DH59 ACTG1P14-201ENST00000446382 1122 ntBASIC16.36■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms