Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
TRAV5A0A0B4J249 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
TRAV5A0A0B4J249 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TRAV5A0A0B4J249 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
TRAV5A0A0B4J249 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
TRAV5A0A0B4J249 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC13.06□□□□□ -0.32
TRAV5A0A0B4J249 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
TRAV5A0A0B4J249 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
TRAV5A0A0B4J249 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
TRAV5A0A0B4J249 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
TRAV5A0A0B4J249 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
TRAV5A0A0B4J249 AC010491.1-201ENST00000563101 2797 ntBASIC13.05□□□□□ -0.32
TRAV5A0A0B4J249 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC13.05□□□□□ -0.32
TRAV5A0A0B4J249 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
TRAV5A0A0B4J249 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TRAV5A0A0B4J249 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
TRAV5A0A0B4J249 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TRAV5A0A0B4J249 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TRAV5A0A0B4J249 AP002414.2-201ENST00000591780 3365 ntBASIC13.05□□□□□ -0.32
TRAV5A0A0B4J249 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC13.05□□□□□ -0.32
TRAV5A0A0B4J249 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
TRAV5A0A0B4J249 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
TRAV5A0A0B4J249 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
TRAV5A0A0B4J249 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC13.05□□□□□ -0.32
TRAV5A0A0B4J249 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC13.05□□□□□ -0.32
TRAV5A0A0B4J249 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TRAV5A0A0B4J249 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
TRAV5A0A0B4J249 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
TRAV5A0A0B4J249 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TRAV5A0A0B4J249 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
TRAV5A0A0B4J249 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
TRAV5A0A0B4J249 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC13.05□□□□□ -0.32
TRAV5A0A0B4J249 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TRAV5A0A0B4J249 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TRAV5A0A0B4J249 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TRAV5A0A0B4J249 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC13.05□□□□□ -0.32
TRAV5A0A0B4J249 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC13.05□□□□□ -0.32
TRAV5A0A0B4J249 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC13.05□□□□□ -0.32
TRAV5A0A0B4J249 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TRAV5A0A0B4J249 SIGLEC30P-201ENST00000455569 941 ntBASIC13.05□□□□□ -0.32
TRAV5A0A0B4J249 AC063952.2-201ENST00000498792 1227 ntBASIC13.05□□□□□ -0.32
TRAV5A0A0B4J249 KRT8P26-201ENST00000534154 1276 ntBASIC13.05□□□□□ -0.32
TRAV5A0A0B4J249 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC13.05□□□□□ -0.32
TRAV5A0A0B4J249 RBM42-202ENST00000586618 771 ntTSL 3 BASIC13.05□□□□□ -0.32
TRAV5A0A0B4J249 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC13.05□□□□□ -0.32
TRAV5A0A0B4J249 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC13.05□□□□□ -0.32
TRAV5A0A0B4J249 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC13.05□□□□□ -0.32
TRAV5A0A0B4J249 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
TRAV5A0A0B4J249 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
TRAV5A0A0B4J249 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
TRAV5A0A0B4J249 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
TRAV5A0A0B4J249 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
TRAV5A0A0B4J249 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TRAV5A0A0B4J249 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TRAV5A0A0B4J249 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC13.05□□□□□ -0.32
TRAV5A0A0B4J249 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC13.05□□□□□ -0.32
TRAV5A0A0B4J249 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TRAV5A0A0B4J249 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TRAV5A0A0B4J249 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
TRAV5A0A0B4J249 AC097637.2-201ENST00000624096 1997 ntBASIC13.05□□□□□ -0.32
TRAV5A0A0B4J249 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TRAV5A0A0B4J249 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
TRAV5A0A0B4J249 AC144831.1-201ENST00000573312 2656 ntBASIC13.05□□□□□ -0.32
TRAV5A0A0B4J249 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TRAV5A0A0B4J249 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC13.04□□□□□ -0.32
TRAV5A0A0B4J249 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TRAV5A0A0B4J249 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC13.04□□□□□ -0.32
TRAV5A0A0B4J249 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TRAV5A0A0B4J249 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
TRAV5A0A0B4J249 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TRAV5A0A0B4J249 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC13.04□□□□□ -0.32
TRAV5A0A0B4J249 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TRAV5A0A0B4J249 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TRAV5A0A0B4J249 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC13.04□□□□□ -0.32
TRAV5A0A0B4J249 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
TRAV5A0A0B4J249 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
TRAV5A0A0B4J249 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
TRAV5A0A0B4J249 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
TRAV5A0A0B4J249 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
TRAV5A0A0B4J249 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TRAV5A0A0B4J249 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC13.04□□□□□ -0.32
TRAV5A0A0B4J249 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC13.04□□□□□ -0.32
TRAV5A0A0B4J249 ACTG1P4-201ENST00000425123 1122 ntBASIC13.04□□□□□ -0.32
TRAV5A0A0B4J249 AC246785.2-201ENST00000432512 513 ntBASIC13.04□□□□□ -0.32
TRAV5A0A0B4J249 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
TRAV5A0A0B4J249 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC13.04□□□□□ -0.32
TRAV5A0A0B4J249 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC13.04□□□□□ -0.32
TRAV5A0A0B4J249 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC13.04□□□□□ -0.32
TRAV5A0A0B4J249 ABR-204ENST00000543210 1049 ntTSL 2 BASIC13.04□□□□□ -0.32
TRAV5A0A0B4J249 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC13.04□□□□□ -0.32
TRAV5A0A0B4J249 ABR-217ENST00000572441 563 ntTSL 4 BASIC13.04□□□□□ -0.32
TRAV5A0A0B4J249 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
TRAV5A0A0B4J249 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TRAV5A0A0B4J249 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
TRAV5A0A0B4J249 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TRAV5A0A0B4J249 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC13.04□□□□□ -0.32
TRAV5A0A0B4J249 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
TRAV5A0A0B4J249 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
TRAV5A0A0B4J249 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC13.04□□□□□ -0.32
TRAV5A0A0B4J249 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms