Protein–RNA interactions for Protein: A0A0A0MS04

TRBV6-7, T-cell receptor beta variable 6-7 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-7A0A0A0MS04 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
TRBV6-7A0A0A0MS04 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRBV6-7A0A0A0MS04 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRBV6-7A0A0A0MS04 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
TRBV6-7A0A0A0MS04 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
TRBV6-7A0A0A0MS04 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRBV6-7A0A0A0MS04 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRBV6-7A0A0A0MS04 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TRBV6-7A0A0A0MS04 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRBV6-7A0A0A0MS04 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRBV6-7A0A0A0MS04 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRBV6-7A0A0A0MS04 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
TRBV6-7A0A0A0MS04 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRBV6-7A0A0A0MS04 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TRBV6-7A0A0A0MS04 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TRBV6-7A0A0A0MS04 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRBV6-7A0A0A0MS04 ISCU-203ENST00000431221 799 ntTSL 2 BASIC14.03□□□□□ -0.16
TRBV6-7A0A0A0MS04 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC14.03□□□□□ -0.16
TRBV6-7A0A0A0MS04 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC14.03□□□□□ -0.16
TRBV6-7A0A0A0MS04 AC012615.1-201ENST00000565797 1299 ntBASIC14.03□□□□□ -0.16
TRBV6-7A0A0A0MS04 MIR3180-1-201ENST00000580374 94 ntBASIC14.03□□□□□ -0.16
TRBV6-7A0A0A0MS04 CYB561-217ENST00000582997 877 ntTSL 5 BASIC14.03□□□□□ -0.16
TRBV6-7A0A0A0MS04 MIR3180-3-201ENST00000584616 94 ntBASIC14.03□□□□□ -0.16
TRBV6-7A0A0A0MS04 TERC-201ENST00000602385 541 ntBASIC14.03□□□□□ -0.16
TRBV6-7A0A0A0MS04 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
TRBV6-7A0A0A0MS04 CCNC-219ENST00000627680 896 ntTSL 5 BASIC14.03□□□□□ -0.16
TRBV6-7A0A0A0MS04 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TRBV6-7A0A0A0MS04 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRBV6-7A0A0A0MS04 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC14.03□□□□□ -0.16
TRBV6-7A0A0A0MS04 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRBV6-7A0A0A0MS04 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRBV6-7A0A0A0MS04 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC14.03□□□□□ -0.16
TRBV6-7A0A0A0MS04 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TRBV6-7A0A0A0MS04 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
TRBV6-7A0A0A0MS04 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
TRBV6-7A0A0A0MS04 GCK-202ENST00000345378 2421 ntTSL 2 BASIC14.03□□□□□ -0.16
TRBV6-7A0A0A0MS04 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRBV6-7A0A0A0MS04 TSPY26P-202ENST00000565928 3884 ntBASIC14.03□□□□□ -0.16
TRBV6-7A0A0A0MS04 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRBV6-7A0A0A0MS04 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRBV6-7A0A0A0MS04 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRBV6-7A0A0A0MS04 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRBV6-7A0A0A0MS04 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
TRBV6-7A0A0A0MS04 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRBV6-7A0A0A0MS04 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRBV6-7A0A0A0MS04 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRBV6-7A0A0A0MS04 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
TRBV6-7A0A0A0MS04 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRBV6-7A0A0A0MS04 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
TRBV6-7A0A0A0MS04 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRBV6-7A0A0A0MS04 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
TRBV6-7A0A0A0MS04 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC14.02□□□□□ -0.16
TRBV6-7A0A0A0MS04 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC14.02□□□□□ -0.16
TRBV6-7A0A0A0MS04 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC14.02□□□□□ -0.16
TRBV6-7A0A0A0MS04 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC14.02□□□□□ -0.16
TRBV6-7A0A0A0MS04 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
TRBV6-7A0A0A0MS04 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
TRBV6-7A0A0A0MS04 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRBV6-7A0A0A0MS04 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRBV6-7A0A0A0MS04 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC14.02□□□□□ -0.16
TRBV6-7A0A0A0MS04 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC14.02□□□□□ -0.16
TRBV6-7A0A0A0MS04 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC14.02□□□□□ -0.16
TRBV6-7A0A0A0MS04 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRBV6-7A0A0A0MS04 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRBV6-7A0A0A0MS04 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
TRBV6-7A0A0A0MS04 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRBV6-7A0A0A0MS04 AC006277.1-201ENST00000624348 1610 ntBASIC14.02□□□□□ -0.16
TRBV6-7A0A0A0MS04 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRBV6-7A0A0A0MS04 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRBV6-7A0A0A0MS04 AC243591.1-201ENST00000452967 1364 ntBASIC14.02□□□□□ -0.17
TRBV6-7A0A0A0MS04 AL590787.1-201ENST00000568856 1315 ntBASIC14.02□□□□□ -0.17
TRBV6-7A0A0A0MS04 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC14.02□□□□□ -0.17
TRBV6-7A0A0A0MS04 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC14.02□□□□□ -0.17
TRBV6-7A0A0A0MS04 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRBV6-7A0A0A0MS04 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
TRBV6-7A0A0A0MS04 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
TRBV6-7A0A0A0MS04 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRBV6-7A0A0A0MS04 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRBV6-7A0A0A0MS04 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRBV6-7A0A0A0MS04 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC14.02□□□□□ -0.17
TRBV6-7A0A0A0MS04 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRBV6-7A0A0A0MS04 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRBV6-7A0A0A0MS04 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
TRBV6-7A0A0A0MS04 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
TRBV6-7A0A0A0MS04 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
TRBV6-7A0A0A0MS04 AP000867.3-201ENST00000524675 377 ntBASIC14.02□□□□□ -0.17
TRBV6-7A0A0A0MS04 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC14.02□□□□□ -0.17
TRBV6-7A0A0A0MS04 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC14.02□□□□□ -0.17
TRBV6-7A0A0A0MS04 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC14.02□□□□□ -0.17
TRBV6-7A0A0A0MS04 MIR5100-201ENST00000579544 119 ntBASIC14.02□□□□□ -0.17
TRBV6-7A0A0A0MS04 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC14.02□□□□□ -0.17
TRBV6-7A0A0A0MS04 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC14.02□□□□□ -0.17
TRBV6-7A0A0A0MS04 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRBV6-7A0A0A0MS04 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
TRBV6-7A0A0A0MS04 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
TRBV6-7A0A0A0MS04 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
TRBV6-7A0A0A0MS04 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRBV6-7A0A0A0MS04 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC14.02□□□□□ -0.17
TRBV6-7A0A0A0MS04 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC14.02□□□□□ -0.17
TRBV6-7A0A0A0MS04 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC14.02□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms