Protein–RNA interactions for Protein: Q9Y5G1

PCDHGB3, Protocadherin gamma-B3, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3Q9Y5G1 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC15.95■□□□□ 0.14
PCDHGB3Q9Y5G1 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
PCDHGB3Q9Y5G1 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC15.95■□□□□ 0.14
PCDHGB3Q9Y5G1 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHGB3Q9Y5G1 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC15.95■□□□□ 0.14
PCDHGB3Q9Y5G1 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC15.95■□□□□ 0.14
PCDHGB3Q9Y5G1 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHGB3Q9Y5G1 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
PCDHGB3Q9Y5G1 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
PCDHGB3Q9Y5G1 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC15.95■□□□□ 0.14
PCDHGB3Q9Y5G1 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHGB3Q9Y5G1 AL513523.2-202ENST00000427283 2040 ntBASIC15.95■□□□□ 0.14
PCDHGB3Q9Y5G1 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC15.95■□□□□ 0.14
PCDHGB3Q9Y5G1 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHGB3Q9Y5G1 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHGB3Q9Y5G1 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
PCDHGB3Q9Y5G1 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHGB3Q9Y5G1 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHGB3Q9Y5G1 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHGB3Q9Y5G1 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC15.94■□□□□ 0.14
PCDHGB3Q9Y5G1 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
PCDHGB3Q9Y5G1 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC15.94■□□□□ 0.14
PCDHGB3Q9Y5G1 AC008894.3-201ENST00000624324 3103 ntBASIC15.94■□□□□ 0.14
PCDHGB3Q9Y5G1 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHGB3Q9Y5G1 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHGB3Q9Y5G1 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHGB3Q9Y5G1 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHGB3Q9Y5G1 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHGB3Q9Y5G1 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHGB3Q9Y5G1 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC15.94■□□□□ 0.14
PCDHGB3Q9Y5G1 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
PCDHGB3Q9Y5G1 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
PCDHGB3Q9Y5G1 FRMD6-AS1-201ENST00000617151 2229 ntBASIC15.94■□□□□ 0.14
PCDHGB3Q9Y5G1 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC15.94■□□□□ 0.14
PCDHGB3Q9Y5G1 AC008741.2-201ENST00000612792 3115 ntBASIC15.94■□□□□ 0.14
PCDHGB3Q9Y5G1 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC15.94■□□□□ 0.14
PCDHGB3Q9Y5G1 AL590627.1-203ENST00000421194 1026 ntBASIC15.94■□□□□ 0.14
PCDHGB3Q9Y5G1 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC15.94■□□□□ 0.14
PCDHGB3Q9Y5G1 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC15.94■□□□□ 0.14
PCDHGB3Q9Y5G1 AC079776.4-201ENST00000511039 504 ntBASIC15.94■□□□□ 0.14
PCDHGB3Q9Y5G1 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHGB3Q9Y5G1 MSRA-206ENST00000521209 814 ntTSL 3 BASIC15.94■□□□□ 0.14
PCDHGB3Q9Y5G1 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC15.94■□□□□ 0.14
PCDHGB3Q9Y5G1 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC15.94■□□□□ 0.14
PCDHGB3Q9Y5G1 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC15.94■□□□□ 0.14
PCDHGB3Q9Y5G1 PRKN-208ENST00000610470 531 ntTSL 2 BASIC15.94■□□□□ 0.14
PCDHGB3Q9Y5G1 PRKN-209ENST00000612485 225 ntTSL 5 BASIC15.94■□□□□ 0.14
PCDHGB3Q9Y5G1 AL589182.2-201ENST00000619332 1049 ntBASIC15.94■□□□□ 0.14
PCDHGB3Q9Y5G1 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC15.94■□□□□ 0.14
PCDHGB3Q9Y5G1 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC15.94■□□□□ 0.14
PCDHGB3Q9Y5G1 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC15.94■□□□□ 0.14
PCDHGB3Q9Y5G1 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC15.94■□□□□ 0.14
PCDHGB3Q9Y5G1 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHGB3Q9Y5G1 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC15.94■□□□□ 0.14
PCDHGB3Q9Y5G1 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
PCDHGB3Q9Y5G1 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHGB3Q9Y5G1 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHGB3Q9Y5G1 AC079328.2-201ENST00000561241 3354 ntBASIC15.94■□□□□ 0.14
PCDHGB3Q9Y5G1 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHGB3Q9Y5G1 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHGB3Q9Y5G1 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHGB3Q9Y5G1 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC15.94■□□□□ 0.14
PCDHGB3Q9Y5G1 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC15.94■□□□□ 0.14
PCDHGB3Q9Y5G1 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHGB3Q9Y5G1 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHGB3Q9Y5G1 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHGB3Q9Y5G1 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC15.94■□□□□ 0.14
PCDHGB3Q9Y5G1 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC15.94■□□□□ 0.14
PCDHGB3Q9Y5G1 FRMD8P1-201ENST00000440433 1524 ntBASIC15.94■□□□□ 0.14
PCDHGB3Q9Y5G1 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHGB3Q9Y5G1 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PCDHGB3Q9Y5G1 AGK-211ENST00000629555 2765 ntTSL 5 BASIC15.93■□□□□ 0.14
PCDHGB3Q9Y5G1 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PCDHGB3Q9Y5G1 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PCDHGB3Q9Y5G1 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
PCDHGB3Q9Y5G1 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PCDHGB3Q9Y5G1 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
PCDHGB3Q9Y5G1 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
PCDHGB3Q9Y5G1 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
PCDHGB3Q9Y5G1 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
PCDHGB3Q9Y5G1 AL021920.2-201ENST00000624828 1351 ntBASIC15.93■□□□□ 0.14
PCDHGB3Q9Y5G1 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PCDHGB3Q9Y5G1 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PCDHGB3Q9Y5G1 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
PCDHGB3Q9Y5G1 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PCDHGB3Q9Y5G1 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
PCDHGB3Q9Y5G1 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
PCDHGB3Q9Y5G1 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC15.93■□□□□ 0.14
PCDHGB3Q9Y5G1 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
PCDHGB3Q9Y5G1 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
PCDHGB3Q9Y5G1 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC15.93■□□□□ 0.14
PCDHGB3Q9Y5G1 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC15.93■□□□□ 0.14
PCDHGB3Q9Y5G1 CYB561-217ENST00000582997 877 ntTSL 5 BASIC15.93■□□□□ 0.14
PCDHGB3Q9Y5G1 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC15.93■□□□□ 0.14
PCDHGB3Q9Y5G1 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC15.93■□□□□ 0.14
PCDHGB3Q9Y5G1 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC15.93■□□□□ 0.14
PCDHGB3Q9Y5G1 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PCDHGB3Q9Y5G1 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
PCDHGB3Q9Y5G1 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
PCDHGB3Q9Y5G1 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC15.93■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 67.7 ms