Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC16.41■□□□□ 0.22
PCDHB11Q9Y5F2 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCDHB11Q9Y5F2 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC16.41■□□□□ 0.22
PCDHB11Q9Y5F2 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC16.41■□□□□ 0.22
PCDHB11Q9Y5F2 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCDHB11Q9Y5F2 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCDHB11Q9Y5F2 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCDHB11Q9Y5F2 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
PCDHB11Q9Y5F2 TSEN15P1-201ENST00000423257 515 ntBASIC16.41■□□□□ 0.22
PCDHB11Q9Y5F2 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC16.41■□□□□ 0.22
PCDHB11Q9Y5F2 RHOQP3-201ENST00000437982 621 ntBASIC16.41■□□□□ 0.22
PCDHB11Q9Y5F2 CXCL1P1-201ENST00000502804 216 ntBASIC16.41■□□□□ 0.22
PCDHB11Q9Y5F2 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC16.41■□□□□ 0.22
PCDHB11Q9Y5F2 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
PCDHB11Q9Y5F2 POLD4-207ENST00000531239 584 ntTSL 2 BASIC16.41■□□□□ 0.22
PCDHB11Q9Y5F2 PUS1-205ENST00000535067 838 ntTSL 3 BASIC16.41■□□□□ 0.22
PCDHB11Q9Y5F2 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
PCDHB11Q9Y5F2 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCDHB11Q9Y5F2 AC004835.2-201ENST00000603762 682 ntBASIC16.41■□□□□ 0.22
PCDHB11Q9Y5F2 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC16.41■□□□□ 0.22
PCDHB11Q9Y5F2 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCDHB11Q9Y5F2 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
PCDHB11Q9Y5F2 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCDHB11Q9Y5F2 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC16.41■□□□□ 0.22
PCDHB11Q9Y5F2 AC025580.3-201ENST00000617932 1424 ntBASIC16.41■□□□□ 0.22
PCDHB11Q9Y5F2 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC16.41■□□□□ 0.22
PCDHB11Q9Y5F2 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC16.41■□□□□ 0.22
PCDHB11Q9Y5F2 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PCDHB11Q9Y5F2 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC16.41■□□□□ 0.22
PCDHB11Q9Y5F2 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC16.41■□□□□ 0.22
PCDHB11Q9Y5F2 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCDHB11Q9Y5F2 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PCDHB11Q9Y5F2 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCDHB11Q9Y5F2 PC-214ENST00000628663 1470 ntTSL 5 BASIC16.41■□□□□ 0.22
PCDHB11Q9Y5F2 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
PCDHB11Q9Y5F2 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCDHB11Q9Y5F2 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCDHB11Q9Y5F2 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCDHB11Q9Y5F2 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCDHB11Q9Y5F2 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCDHB11Q9Y5F2 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
PCDHB11Q9Y5F2 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHB11Q9Y5F2 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHB11Q9Y5F2 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC16.4■□□□□ 0.22
PCDHB11Q9Y5F2 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHB11Q9Y5F2 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHB11Q9Y5F2 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHB11Q9Y5F2 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHB11Q9Y5F2 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
PCDHB11Q9Y5F2 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHB11Q9Y5F2 AC092068.3-201ENST00000587894 2016 ntBASIC16.4■□□□□ 0.22
PCDHB11Q9Y5F2 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHB11Q9Y5F2 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHB11Q9Y5F2 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHB11Q9Y5F2 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHB11Q9Y5F2 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHB11Q9Y5F2 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHB11Q9Y5F2 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHB11Q9Y5F2 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC16.4■□□□□ 0.22
PCDHB11Q9Y5F2 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC16.4■□□□□ 0.22
PCDHB11Q9Y5F2 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC16.4■□□□□ 0.22
PCDHB11Q9Y5F2 DUX4L17-201ENST00000557360 1267 ntBASIC16.4■□□□□ 0.22
PCDHB11Q9Y5F2 AL031432.2-201ENST00000566714 459 ntBASIC16.4■□□□□ 0.22
PCDHB11Q9Y5F2 AL928711.1-201ENST00000570165 459 ntBASIC16.4■□□□□ 0.22
PCDHB11Q9Y5F2 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC16.4■□□□□ 0.22
PCDHB11Q9Y5F2 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC16.4■□□□□ 0.22
PCDHB11Q9Y5F2 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHB11Q9Y5F2 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHB11Q9Y5F2 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHB11Q9Y5F2 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
PCDHB11Q9Y5F2 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHB11Q9Y5F2 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHB11Q9Y5F2 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
PCDHB11Q9Y5F2 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHB11Q9Y5F2 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
PCDHB11Q9Y5F2 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHB11Q9Y5F2 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHB11Q9Y5F2 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHB11Q9Y5F2 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHB11Q9Y5F2 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHB11Q9Y5F2 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC16.39■□□□□ 0.22
PCDHB11Q9Y5F2 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC16.39■□□□□ 0.21
PCDHB11Q9Y5F2 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCDHB11Q9Y5F2 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PCDHB11Q9Y5F2 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
PCDHB11Q9Y5F2 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PCDHB11Q9Y5F2 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCDHB11Q9Y5F2 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCDHB11Q9Y5F2 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC16.39■□□□□ 0.21
PCDHB11Q9Y5F2 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC16.39■□□□□ 0.21
PCDHB11Q9Y5F2 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCDHB11Q9Y5F2 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC16.39■□□□□ 0.21
PCDHB11Q9Y5F2 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC16.39■□□□□ 0.21
PCDHB11Q9Y5F2 WDR53-203ENST00000429115 683 ntTSL 2 BASIC16.39■□□□□ 0.21
PCDHB11Q9Y5F2 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCDHB11Q9Y5F2 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC16.39■□□□□ 0.21
PCDHB11Q9Y5F2 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC16.39■□□□□ 0.21
PCDHB11Q9Y5F2 METTL23-205ENST00000588302 925 ntTSL 5 BASIC16.39■□□□□ 0.21
PCDHB11Q9Y5F2 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC16.39■□□□□ 0.21
PCDHB11Q9Y5F2 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms