Protein–RNA interactions for Protein: Q9Y5E7

PCDHB2, Protocadherin beta-2, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB2Q9Y5E7 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHB2Q9Y5E7 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHB2Q9Y5E7 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
PCDHB2Q9Y5E7 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PCDHB2Q9Y5E7 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PCDHB2Q9Y5E7 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PCDHB2Q9Y5E7 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PCDHB2Q9Y5E7 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
PCDHB2Q9Y5E7 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
PCDHB2Q9Y5E7 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PCDHB2Q9Y5E7 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
PCDHB2Q9Y5E7 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC18.27■□□□□ 0.52
PCDHB2Q9Y5E7 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PCDHB2Q9Y5E7 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PCDHB2Q9Y5E7 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC18.27■□□□□ 0.52
PCDHB2Q9Y5E7 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PCDHB2Q9Y5E7 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC18.27■□□□□ 0.52
PCDHB2Q9Y5E7 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
PCDHB2Q9Y5E7 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PCDHB2Q9Y5E7 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PCDHB2Q9Y5E7 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PCDHB2Q9Y5E7 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC18.27■□□□□ 0.52
PCDHB2Q9Y5E7 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC18.27■□□□□ 0.52
PCDHB2Q9Y5E7 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC18.27■□□□□ 0.52
PCDHB2Q9Y5E7 SPCS2P4-201ENST00000436160 681 ntBASIC18.27■□□□□ 0.52
PCDHB2Q9Y5E7 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PCDHB2Q9Y5E7 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PCDHB2Q9Y5E7 AC069335.1-201ENST00000489972 472 ntBASIC18.27■□□□□ 0.52
PCDHB2Q9Y5E7 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC18.27■□□□□ 0.52
PCDHB2Q9Y5E7 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
PCDHB2Q9Y5E7 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PCDHB2Q9Y5E7 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PCDHB2Q9Y5E7 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PCDHB2Q9Y5E7 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
PCDHB2Q9Y5E7 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
PCDHB2Q9Y5E7 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
PCDHB2Q9Y5E7 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC18.27■□□□□ 0.52
PCDHB2Q9Y5E7 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
PCDHB2Q9Y5E7 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
PCDHB2Q9Y5E7 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC18.27■□□□□ 0.51
PCDHB2Q9Y5E7 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
PCDHB2Q9Y5E7 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
PCDHB2Q9Y5E7 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC18.27■□□□□ 0.51
PCDHB2Q9Y5E7 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
PCDHB2Q9Y5E7 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
PCDHB2Q9Y5E7 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHB2Q9Y5E7 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHB2Q9Y5E7 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHB2Q9Y5E7 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC18.26■□□□□ 0.51
PCDHB2Q9Y5E7 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHB2Q9Y5E7 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHB2Q9Y5E7 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC18.26■□□□□ 0.51
PCDHB2Q9Y5E7 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
PCDHB2Q9Y5E7 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHB2Q9Y5E7 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
PCDHB2Q9Y5E7 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHB2Q9Y5E7 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHB2Q9Y5E7 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHB2Q9Y5E7 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC18.26■□□□□ 0.51
PCDHB2Q9Y5E7 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHB2Q9Y5E7 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC18.26■□□□□ 0.51
PCDHB2Q9Y5E7 PMS2P4-201ENST00000412466 1052 ntBASIC18.26■□□□□ 0.51
PCDHB2Q9Y5E7 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC18.26■□□□□ 0.51
PCDHB2Q9Y5E7 FAM58DP-201ENST00000428076 619 ntBASIC18.26■□□□□ 0.51
PCDHB2Q9Y5E7 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHB2Q9Y5E7 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHB2Q9Y5E7 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC18.26■□□□□ 0.51
PCDHB2Q9Y5E7 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHB2Q9Y5E7 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
PCDHB2Q9Y5E7 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC18.26■□□□□ 0.51
PCDHB2Q9Y5E7 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC18.26■□□□□ 0.51
PCDHB2Q9Y5E7 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHB2Q9Y5E7 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC18.26■□□□□ 0.51
PCDHB2Q9Y5E7 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
PCDHB2Q9Y5E7 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHB2Q9Y5E7 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHB2Q9Y5E7 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC18.26■□□□□ 0.51
PCDHB2Q9Y5E7 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
PCDHB2Q9Y5E7 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHB2Q9Y5E7 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHB2Q9Y5E7 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
PCDHB2Q9Y5E7 WASH6P-202ENST00000359512 1437 ntBASIC18.25■□□□□ 0.51
PCDHB2Q9Y5E7 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
PCDHB2Q9Y5E7 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHB2Q9Y5E7 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC18.25■□□□□ 0.51
PCDHB2Q9Y5E7 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHB2Q9Y5E7 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC18.25■□□□□ 0.51
PCDHB2Q9Y5E7 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHB2Q9Y5E7 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHB2Q9Y5E7 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHB2Q9Y5E7 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHB2Q9Y5E7 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHB2Q9Y5E7 KRT18P32-201ENST00000424695 1287 ntBASIC18.25■□□□□ 0.51
PCDHB2Q9Y5E7 TSFM-210ENST00000550559 897 ntTSL 5 BASIC18.25■□□□□ 0.51
PCDHB2Q9Y5E7 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC18.25■□□□□ 0.51
PCDHB2Q9Y5E7 LINC01225-203ENST00000563550 1244 ntBASIC18.25■□□□□ 0.51
PCDHB2Q9Y5E7 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC18.25■□□□□ 0.51
PCDHB2Q9Y5E7 MIR3909-201ENST00000579518 119 ntBASIC18.25■□□□□ 0.51
PCDHB2Q9Y5E7 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC18.25■□□□□ 0.51
PCDHB2Q9Y5E7 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms