Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
UBE2D4Q9Y2X8 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
UBE2D4Q9Y2X8 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
UBE2D4Q9Y2X8 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
UBE2D4Q9Y2X8 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
UBE2D4Q9Y2X8 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC11.7□□□□□ -0.54
UBE2D4Q9Y2X8 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
UBE2D4Q9Y2X8 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
UBE2D4Q9Y2X8 TP73-AS1-210ENST00000637775 1455 ntBASIC11.7□□□□□ -0.54
UBE2D4Q9Y2X8 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
UBE2D4Q9Y2X8 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
UBE2D4Q9Y2X8 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
UBE2D4Q9Y2X8 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC11.69□□□□□ -0.54
UBE2D4Q9Y2X8 AL603832.2-201ENST00000566195 2125 ntBASIC11.69□□□□□ -0.54
UBE2D4Q9Y2X8 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
UBE2D4Q9Y2X8 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
UBE2D4Q9Y2X8 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
UBE2D4Q9Y2X8 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC11.69□□□□□ -0.54
UBE2D4Q9Y2X8 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
UBE2D4Q9Y2X8 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC11.69□□□□□ -0.54
UBE2D4Q9Y2X8 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
UBE2D4Q9Y2X8 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
UBE2D4Q9Y2X8 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
UBE2D4Q9Y2X8 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC11.69□□□□□ -0.54
UBE2D4Q9Y2X8 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
UBE2D4Q9Y2X8 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
UBE2D4Q9Y2X8 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
UBE2D4Q9Y2X8 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC11.69□□□□□ -0.54
UBE2D4Q9Y2X8 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
UBE2D4Q9Y2X8 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
UBE2D4Q9Y2X8 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC11.69□□□□□ -0.54
UBE2D4Q9Y2X8 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC11.69□□□□□ -0.54
UBE2D4Q9Y2X8 KRT18P57-201ENST00000443599 1254 ntBASIC11.69□□□□□ -0.54
UBE2D4Q9Y2X8 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC11.69□□□□□ -0.54
UBE2D4Q9Y2X8 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC11.69□□□□□ -0.54
UBE2D4Q9Y2X8 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC11.69□□□□□ -0.54
UBE2D4Q9Y2X8 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
UBE2D4Q9Y2X8 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC11.69□□□□□ -0.54
UBE2D4Q9Y2X8 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
UBE2D4Q9Y2X8 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
UBE2D4Q9Y2X8 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
UBE2D4Q9Y2X8 MBP-202ENST00000355994 2772 ntTSL 5 BASIC11.69□□□□□ -0.54
UBE2D4Q9Y2X8 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
UBE2D4Q9Y2X8 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
UBE2D4Q9Y2X8 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
UBE2D4Q9Y2X8 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
UBE2D4Q9Y2X8 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
UBE2D4Q9Y2X8 MYB-201ENST00000316528 3571 ntTSL 5 BASIC11.69□□□□□ -0.54
UBE2D4Q9Y2X8 MYB-241ENST00000616088 3573 ntTSL 5 BASIC11.69□□□□□ -0.54
UBE2D4Q9Y2X8 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
UBE2D4Q9Y2X8 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
UBE2D4Q9Y2X8 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC11.69□□□□□ -0.54
UBE2D4Q9Y2X8 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
UBE2D4Q9Y2X8 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC11.69□□□□□ -0.54
UBE2D4Q9Y2X8 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
UBE2D4Q9Y2X8 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
UBE2D4Q9Y2X8 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
UBE2D4Q9Y2X8 AC097637.2-201ENST00000624096 1997 ntBASIC11.68□□□□□ -0.54
UBE2D4Q9Y2X8 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC11.68□□□□□ -0.54
UBE2D4Q9Y2X8 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC11.68□□□□□ -0.54
UBE2D4Q9Y2X8 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
UBE2D4Q9Y2X8 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
UBE2D4Q9Y2X8 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
UBE2D4Q9Y2X8 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
UBE2D4Q9Y2X8 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
UBE2D4Q9Y2X8 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
UBE2D4Q9Y2X8 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC11.68□□□□□ -0.54
UBE2D4Q9Y2X8 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
UBE2D4Q9Y2X8 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
UBE2D4Q9Y2X8 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
UBE2D4Q9Y2X8 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
UBE2D4Q9Y2X8 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
UBE2D4Q9Y2X8 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
UBE2D4Q9Y2X8 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC11.68□□□□□ -0.54
UBE2D4Q9Y2X8 AC104640.1-201ENST00000562617 2109 ntBASIC11.68□□□□□ -0.54
UBE2D4Q9Y2X8 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
UBE2D4Q9Y2X8 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC11.68□□□□□ -0.54
UBE2D4Q9Y2X8 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
UBE2D4Q9Y2X8 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC11.68□□□□□ -0.54
UBE2D4Q9Y2X8 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
UBE2D4Q9Y2X8 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
UBE2D4Q9Y2X8 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
UBE2D4Q9Y2X8 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC11.68□□□□□ -0.54
UBE2D4Q9Y2X8 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC11.68□□□□□ -0.54
UBE2D4Q9Y2X8 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC11.68□□□□□ -0.54
UBE2D4Q9Y2X8 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
UBE2D4Q9Y2X8 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC11.68□□□□□ -0.54
UBE2D4Q9Y2X8 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC11.68□□□□□ -0.54
UBE2D4Q9Y2X8 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC11.68□□□□□ -0.54
UBE2D4Q9Y2X8 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC11.68□□□□□ -0.54
UBE2D4Q9Y2X8 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC11.68□□□□□ -0.54
UBE2D4Q9Y2X8 AC091607.1-201ENST00000490318 1060 ntBASIC11.68□□□□□ -0.54
UBE2D4Q9Y2X8 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC11.68□□□□□ -0.54
UBE2D4Q9Y2X8 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC11.68□□□□□ -0.54
UBE2D4Q9Y2X8 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC11.68□□□□□ -0.54
UBE2D4Q9Y2X8 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC11.68□□□□□ -0.54
UBE2D4Q9Y2X8 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC11.68□□□□□ -0.54
UBE2D4Q9Y2X8 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
UBE2D4Q9Y2X8 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC11.68□□□□□ -0.54
UBE2D4Q9Y2X8 AC006449.6-201ENST00000612330 2296 ntBASIC11.68□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms