Protein–RNA interactions for Protein: Q9UFN0

NIPSNAP3A, Protein NipSnap homolog 3A, humanhuman

Predicted RBP Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPSNAP3AQ9UFN0 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC16.05■□□□□ 0.16
NIPSNAP3AQ9UFN0 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
NIPSNAP3AQ9UFN0 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC16.05■□□□□ 0.16
NIPSNAP3AQ9UFN0 AC006538.1-201ENST00000567905 1585 ntBASIC16.05■□□□□ 0.16
NIPSNAP3AQ9UFN0 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NIPSNAP3AQ9UFN0 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC16.05■□□□□ 0.16
NIPSNAP3AQ9UFN0 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC16.05■□□□□ 0.16
NIPSNAP3AQ9UFN0 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
NIPSNAP3AQ9UFN0 AC005052.1-201ENST00000625181 2492 ntBASIC16.05■□□□□ 0.16
NIPSNAP3AQ9UFN0 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
NIPSNAP3AQ9UFN0 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC16.05■□□□□ 0.16
NIPSNAP3AQ9UFN0 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
NIPSNAP3AQ9UFN0 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NIPSNAP3AQ9UFN0 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NIPSNAP3AQ9UFN0 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC16.05■□□□□ 0.16
NIPSNAP3AQ9UFN0 AC233702.3-201ENST00000578656 1387 ntBASIC16.05■□□□□ 0.16
NIPSNAP3AQ9UFN0 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC16.05■□□□□ 0.16
NIPSNAP3AQ9UFN0 KRT18P1-202ENST00000452408 1331 ntBASIC16.05■□□□□ 0.16
NIPSNAP3AQ9UFN0 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
NIPSNAP3AQ9UFN0 CCS-201ENST00000310190 942 ntTSL 5 BASIC16.05■□□□□ 0.16
NIPSNAP3AQ9UFN0 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
NIPSNAP3AQ9UFN0 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NIPSNAP3AQ9UFN0 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
NIPSNAP3AQ9UFN0 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC16.05■□□□□ 0.16
NIPSNAP3AQ9UFN0 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC16.05■□□□□ 0.16
NIPSNAP3AQ9UFN0 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
NIPSNAP3AQ9UFN0 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC16.05■□□□□ 0.16
NIPSNAP3AQ9UFN0 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC16.05■□□□□ 0.16
NIPSNAP3AQ9UFN0 DUX4L17-201ENST00000557360 1267 ntBASIC16.05■□□□□ 0.16
NIPSNAP3AQ9UFN0 RN7SL850P-201ENST00000579959 291 ntBASIC16.05■□□□□ 0.16
NIPSNAP3AQ9UFN0 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
NIPSNAP3AQ9UFN0 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC16.05■□□□□ 0.16
NIPSNAP3AQ9UFN0 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC16.05■□□□□ 0.16
NIPSNAP3AQ9UFN0 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
NIPSNAP3AQ9UFN0 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC16.05■□□□□ 0.16
NIPSNAP3AQ9UFN0 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC16.05■□□□□ 0.16
NIPSNAP3AQ9UFN0 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
NIPSNAP3AQ9UFN0 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NIPSNAP3AQ9UFN0 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
NIPSNAP3AQ9UFN0 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
NIPSNAP3AQ9UFN0 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NIPSNAP3AQ9UFN0 INTS4P1-201ENST00000438455 1935 ntBASIC16.05■□□□□ 0.16
NIPSNAP3AQ9UFN0 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC16.05■□□□□ 0.16
NIPSNAP3AQ9UFN0 AL596257.1-201ENST00000641463 2694 ntBASIC16.05■□□□□ 0.16
NIPSNAP3AQ9UFN0 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
NIPSNAP3AQ9UFN0 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
NIPSNAP3AQ9UFN0 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
NIPSNAP3AQ9UFN0 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
NIPSNAP3AQ9UFN0 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
NIPSNAP3AQ9UFN0 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC16.05■□□□□ 0.16
NIPSNAP3AQ9UFN0 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
NIPSNAP3AQ9UFN0 PC-204ENST00000524491 1714 ntTSL 2 BASIC16.05■□□□□ 0.16
NIPSNAP3AQ9UFN0 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
NIPSNAP3AQ9UFN0 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
NIPSNAP3AQ9UFN0 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
NIPSNAP3AQ9UFN0 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
NIPSNAP3AQ9UFN0 LINC00895-201ENST00000629028 1637 ntBASIC16.05■□□□□ 0.16
NIPSNAP3AQ9UFN0 MYB-242ENST00000618728 3545 ntTSL 5 BASIC16.05■□□□□ 0.16
NIPSNAP3AQ9UFN0 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
NIPSNAP3AQ9UFN0 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC16.04■□□□□ 0.16
NIPSNAP3AQ9UFN0 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NIPSNAP3AQ9UFN0 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NIPSNAP3AQ9UFN0 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
NIPSNAP3AQ9UFN0 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
NIPSNAP3AQ9UFN0 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
NIPSNAP3AQ9UFN0 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC16.04■□□□□ 0.16
NIPSNAP3AQ9UFN0 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NIPSNAP3AQ9UFN0 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NIPSNAP3AQ9UFN0 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC16.04■□□□□ 0.16
NIPSNAP3AQ9UFN0 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC16.04■□□□□ 0.16
NIPSNAP3AQ9UFN0 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NIPSNAP3AQ9UFN0 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
NIPSNAP3AQ9UFN0 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
NIPSNAP3AQ9UFN0 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
NIPSNAP3AQ9UFN0 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
NIPSNAP3AQ9UFN0 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
NIPSNAP3AQ9UFN0 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC16.04■□□□□ 0.16
NIPSNAP3AQ9UFN0 FUOM-202ENST00000368551 628 ntTSL 3 BASIC16.04■□□□□ 0.16
NIPSNAP3AQ9UFN0 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC16.04■□□□□ 0.16
NIPSNAP3AQ9UFN0 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
NIPSNAP3AQ9UFN0 SRP19-202ENST00000445150 833 ntTSL 2 BASIC16.04■□□□□ 0.16
NIPSNAP3AQ9UFN0 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC16.04■□□□□ 0.16
NIPSNAP3AQ9UFN0 LTBR-211ENST00000543190 785 ntTSL 3 BASIC16.04■□□□□ 0.16
NIPSNAP3AQ9UFN0 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC16.04■□□□□ 0.16
NIPSNAP3AQ9UFN0 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC16.04■□□□□ 0.16
NIPSNAP3AQ9UFN0 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC16.04■□□□□ 0.16
NIPSNAP3AQ9UFN0 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
NIPSNAP3AQ9UFN0 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
NIPSNAP3AQ9UFN0 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NIPSNAP3AQ9UFN0 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC16.04■□□□□ 0.16
NIPSNAP3AQ9UFN0 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
NIPSNAP3AQ9UFN0 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC16.04■□□□□ 0.16
NIPSNAP3AQ9UFN0 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NIPSNAP3AQ9UFN0 HNRNPRP1-201ENST00000453465 1695 ntBASIC16.04■□□□□ 0.16
NIPSNAP3AQ9UFN0 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NIPSNAP3AQ9UFN0 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
NIPSNAP3AQ9UFN0 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
NIPSNAP3AQ9UFN0 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
NIPSNAP3AQ9UFN0 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
NIPSNAP3AQ9UFN0 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms