Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PPARGC1AQ9UBK2 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PPARGC1AQ9UBK2 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
PPARGC1AQ9UBK2 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
PPARGC1AQ9UBK2 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PPARGC1AQ9UBK2 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
PPARGC1AQ9UBK2 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PPARGC1AQ9UBK2 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
PPARGC1AQ9UBK2 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PPARGC1AQ9UBK2 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC17.46■□□□□ 0.39
PPARGC1AQ9UBK2 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
PPARGC1AQ9UBK2 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PPARGC1AQ9UBK2 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PPARGC1AQ9UBK2 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PPARGC1AQ9UBK2 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
PPARGC1AQ9UBK2 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
PPARGC1AQ9UBK2 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
PPARGC1AQ9UBK2 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PPARGC1AQ9UBK2 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
PPARGC1AQ9UBK2 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PPARGC1AQ9UBK2 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PPARGC1AQ9UBK2 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PPARGC1AQ9UBK2 CYP51A1P2-201ENST00000419457 1499 ntBASIC17.46■□□□□ 0.39
PPARGC1AQ9UBK2 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PPARGC1AQ9UBK2 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
PPARGC1AQ9UBK2 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC17.46■□□□□ 0.39
PPARGC1AQ9UBK2 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
PPARGC1AQ9UBK2 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PPARGC1AQ9UBK2 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PPARGC1AQ9UBK2 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC17.46■□□□□ 0.39
PPARGC1AQ9UBK2 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
PPARGC1AQ9UBK2 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
PPARGC1AQ9UBK2 AP000347.1-202ENST00000435868 847 ntBASIC17.46■□□□□ 0.39
PPARGC1AQ9UBK2 AC096734.2-201ENST00000562054 433 ntBASIC17.46■□□□□ 0.39
PPARGC1AQ9UBK2 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
PPARGC1AQ9UBK2 CYB561-216ENST00000582297 897 ntTSL 3 BASIC17.46■□□□□ 0.39
PPARGC1AQ9UBK2 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC17.46■□□□□ 0.39
PPARGC1AQ9UBK2 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC17.46■□□□□ 0.39
PPARGC1AQ9UBK2 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
PPARGC1AQ9UBK2 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC17.46■□□□□ 0.39
PPARGC1AQ9UBK2 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PPARGC1AQ9UBK2 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PPARGC1AQ9UBK2 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC17.46■□□□□ 0.39
PPARGC1AQ9UBK2 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC17.46■□□□□ 0.39
PPARGC1AQ9UBK2 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC17.46■□□□□ 0.39
PPARGC1AQ9UBK2 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
PPARGC1AQ9UBK2 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
PPARGC1AQ9UBK2 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PPARGC1AQ9UBK2 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PPARGC1AQ9UBK2 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
PPARGC1AQ9UBK2 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.38
PPARGC1AQ9UBK2 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.38
PPARGC1AQ9UBK2 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
PPARGC1AQ9UBK2 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
PPARGC1AQ9UBK2 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PPARGC1AQ9UBK2 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PPARGC1AQ9UBK2 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PPARGC1AQ9UBK2 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PPARGC1AQ9UBK2 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC17.45■□□□□ 0.38
PPARGC1AQ9UBK2 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PPARGC1AQ9UBK2 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC17.45■□□□□ 0.38
PPARGC1AQ9UBK2 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PPARGC1AQ9UBK2 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC17.45■□□□□ 0.38
PPARGC1AQ9UBK2 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PPARGC1AQ9UBK2 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
PPARGC1AQ9UBK2 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
PPARGC1AQ9UBK2 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PPARGC1AQ9UBK2 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC17.45■□□□□ 0.38
PPARGC1AQ9UBK2 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC17.45■□□□□ 0.38
PPARGC1AQ9UBK2 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
PPARGC1AQ9UBK2 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
PPARGC1AQ9UBK2 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PPARGC1AQ9UBK2 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
PPARGC1AQ9UBK2 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
PPARGC1AQ9UBK2 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PPARGC1AQ9UBK2 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
PPARGC1AQ9UBK2 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
PPARGC1AQ9UBK2 BEX3-201ENST00000361298 921 ntTSL 2 BASIC17.45■□□□□ 0.38
PPARGC1AQ9UBK2 PMS2P1-201ENST00000431037 1228 ntBASIC17.45■□□□□ 0.38
PPARGC1AQ9UBK2 RHOQP3-201ENST00000437982 621 ntBASIC17.45■□□□□ 0.38
PPARGC1AQ9UBK2 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC17.45■□□□□ 0.38
PPARGC1AQ9UBK2 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC17.45■□□□□ 0.38
PPARGC1AQ9UBK2 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC17.45■□□□□ 0.38
PPARGC1AQ9UBK2 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC17.45■□□□□ 0.38
PPARGC1AQ9UBK2 KRT18P58-201ENST00000527480 1120 ntBASIC17.45■□□□□ 0.38
PPARGC1AQ9UBK2 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC17.45■□□□□ 0.38
PPARGC1AQ9UBK2 CD63-210ENST00000550776 870 ntTSL 5 BASIC17.45■□□□□ 0.38
PPARGC1AQ9UBK2 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC17.45■□□□□ 0.38
PPARGC1AQ9UBK2 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC17.45■□□□□ 0.38
PPARGC1AQ9UBK2 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
PPARGC1AQ9UBK2 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC17.45■□□□□ 0.38
PPARGC1AQ9UBK2 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC17.45■□□□□ 0.38
PPARGC1AQ9UBK2 AC005412.3-201ENST00000580309 715 ntBASIC17.45■□□□□ 0.38
PPARGC1AQ9UBK2 AC140113.2-201ENST00000604370 208 ntBASIC17.45■□□□□ 0.38
PPARGC1AQ9UBK2 ACTL9-202ENST00000612068 1252 ntBASIC17.45■□□□□ 0.38
PPARGC1AQ9UBK2 BSG-214ENST00000614867 960 ntTSL 3 BASIC17.45■□□□□ 0.38
PPARGC1AQ9UBK2 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC17.45■□□□□ 0.38
PPARGC1AQ9UBK2 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
PPARGC1AQ9UBK2 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC17.45■□□□□ 0.38
PPARGC1AQ9UBK2 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms