Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
NDE1Q9NXR1 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC16.28■□□□□ 0.2
NDE1Q9NXR1 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC16.28■□□□□ 0.2
NDE1Q9NXR1 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC16.28■□□□□ 0.2
NDE1Q9NXR1 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC16.28■□□□□ 0.2
NDE1Q9NXR1 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
NDE1Q9NXR1 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC16.28■□□□□ 0.2
NDE1Q9NXR1 AL596087.1-201ENST00000400979 1969 ntBASIC16.27■□□□□ 0.2
NDE1Q9NXR1 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
NDE1Q9NXR1 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.2
NDE1Q9NXR1 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
NDE1Q9NXR1 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
NDE1Q9NXR1 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
NDE1Q9NXR1 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
NDE1Q9NXR1 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
NDE1Q9NXR1 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC16.27■□□□□ 0.2
NDE1Q9NXR1 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC16.27■□□□□ 0.2
NDE1Q9NXR1 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC16.27■□□□□ 0.2
NDE1Q9NXR1 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
NDE1Q9NXR1 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
NDE1Q9NXR1 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
NDE1Q9NXR1 STK19B-204ENST00000512515 211 ntBASIC16.27■□□□□ 0.2
NDE1Q9NXR1 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC16.27■□□□□ 0.2
NDE1Q9NXR1 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
NDE1Q9NXR1 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC16.27■□□□□ 0.2
NDE1Q9NXR1 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
NDE1Q9NXR1 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
NDE1Q9NXR1 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
NDE1Q9NXR1 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC16.27■□□□□ 0.19
NDE1Q9NXR1 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
NDE1Q9NXR1 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
NDE1Q9NXR1 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC16.27■□□□□ 0.19
NDE1Q9NXR1 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
NDE1Q9NXR1 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
NDE1Q9NXR1 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC16.26■□□□□ 0.19
NDE1Q9NXR1 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
NDE1Q9NXR1 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
NDE1Q9NXR1 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
NDE1Q9NXR1 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NDE1Q9NXR1 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
NDE1Q9NXR1 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NDE1Q9NXR1 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NDE1Q9NXR1 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NDE1Q9NXR1 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC16.26■□□□□ 0.19
NDE1Q9NXR1 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
NDE1Q9NXR1 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
NDE1Q9NXR1 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
NDE1Q9NXR1 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NDE1Q9NXR1 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC16.26■□□□□ 0.19
NDE1Q9NXR1 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NDE1Q9NXR1 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC16.26■□□□□ 0.19
NDE1Q9NXR1 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC16.26■□□□□ 0.19
NDE1Q9NXR1 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
NDE1Q9NXR1 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
NDE1Q9NXR1 Z99916.2-201ENST00000604037 246 ntBASIC16.26■□□□□ 0.19
NDE1Q9NXR1 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC16.26■□□□□ 0.19
NDE1Q9NXR1 AL139011.1-202ENST00000642063 584 ntBASIC16.26■□□□□ 0.19
NDE1Q9NXR1 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC16.26■□□□□ 0.19
NDE1Q9NXR1 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NDE1Q9NXR1 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
NDE1Q9NXR1 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NDE1Q9NXR1 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC16.26■□□□□ 0.19
NDE1Q9NXR1 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC16.26■□□□□ 0.19
NDE1Q9NXR1 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC16.26■□□□□ 0.19
NDE1Q9NXR1 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC16.26■□□□□ 0.19
NDE1Q9NXR1 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC16.26■□□□□ 0.19
NDE1Q9NXR1 ING5-213ENST00000636051 4199 ntTSL 5 BASIC16.26■□□□□ 0.19
NDE1Q9NXR1 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
NDE1Q9NXR1 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NDE1Q9NXR1 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC16.26■□□□□ 0.19
NDE1Q9NXR1 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC16.26■□□□□ 0.19
NDE1Q9NXR1 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
NDE1Q9NXR1 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NDE1Q9NXR1 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
NDE1Q9NXR1 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC16.25■□□□□ 0.19
NDE1Q9NXR1 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
NDE1Q9NXR1 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NDE1Q9NXR1 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
NDE1Q9NXR1 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NDE1Q9NXR1 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
NDE1Q9NXR1 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NDE1Q9NXR1 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
NDE1Q9NXR1 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NDE1Q9NXR1 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
NDE1Q9NXR1 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
NDE1Q9NXR1 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
NDE1Q9NXR1 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
NDE1Q9NXR1 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC16.25■□□□□ 0.19
NDE1Q9NXR1 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC16.25■□□□□ 0.19
NDE1Q9NXR1 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NDE1Q9NXR1 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
NDE1Q9NXR1 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NDE1Q9NXR1 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NDE1Q9NXR1 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NDE1Q9NXR1 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NDE1Q9NXR1 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC16.25■□□□□ 0.19
NDE1Q9NXR1 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
NDE1Q9NXR1 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
NDE1Q9NXR1 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC16.25■□□□□ 0.19
NDE1Q9NXR1 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms