Protein–RNA interactions for Protein: Q9NRR3

CDC42SE2, CDC42 small effector protein 2, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2Q9NRR3 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
CDC42SE2Q9NRR3 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC11.57□□□□□ -0.56
CDC42SE2Q9NRR3 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
CDC42SE2Q9NRR3 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC11.57□□□□□ -0.56
CDC42SE2Q9NRR3 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
CDC42SE2Q9NRR3 AL596087.1-201ENST00000400979 1969 ntBASIC11.57□□□□□ -0.56
CDC42SE2Q9NRR3 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
CDC42SE2Q9NRR3 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC11.57□□□□□ -0.56
CDC42SE2Q9NRR3 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
CDC42SE2Q9NRR3 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
CDC42SE2Q9NRR3 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
CDC42SE2Q9NRR3 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
CDC42SE2Q9NRR3 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
CDC42SE2Q9NRR3 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC11.57□□□□□ -0.56
CDC42SE2Q9NRR3 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC11.57□□□□□ -0.56
CDC42SE2Q9NRR3 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC11.57□□□□□ -0.56
CDC42SE2Q9NRR3 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
CDC42SE2Q9NRR3 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC11.57□□□□□ -0.56
CDC42SE2Q9NRR3 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
CDC42SE2Q9NRR3 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC11.56□□□□□ -0.56
CDC42SE2Q9NRR3 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC11.56□□□□□ -0.56
CDC42SE2Q9NRR3 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC11.56□□□□□ -0.56
CDC42SE2Q9NRR3 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
CDC42SE2Q9NRR3 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
CDC42SE2Q9NRR3 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC11.56□□□□□ -0.56
CDC42SE2Q9NRR3 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC11.56□□□□□ -0.56
CDC42SE2Q9NRR3 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
CDC42SE2Q9NRR3 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
CDC42SE2Q9NRR3 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC11.56□□□□□ -0.56
CDC42SE2Q9NRR3 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC11.56□□□□□ -0.56
CDC42SE2Q9NRR3 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC11.56□□□□□ -0.56
CDC42SE2Q9NRR3 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
CDC42SE2Q9NRR3 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
CDC42SE2Q9NRR3 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
CDC42SE2Q9NRR3 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
CDC42SE2Q9NRR3 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC11.56□□□□□ -0.56
CDC42SE2Q9NRR3 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
CDC42SE2Q9NRR3 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC11.56□□□□□ -0.56
CDC42SE2Q9NRR3 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
CDC42SE2Q9NRR3 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
CDC42SE2Q9NRR3 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
CDC42SE2Q9NRR3 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
CDC42SE2Q9NRR3 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC11.56□□□□□ -0.56
CDC42SE2Q9NRR3 RCN1P1-201ENST00000400413 996 ntBASIC11.56□□□□□ -0.56
CDC42SE2Q9NRR3 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
CDC42SE2Q9NRR3 TMPOP1-202ENST00000424642 1267 ntBASIC11.56□□□□□ -0.56
CDC42SE2Q9NRR3 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
CDC42SE2Q9NRR3 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
CDC42SE2Q9NRR3 LINC00265-3P-201ENST00000447588 903 ntBASIC11.56□□□□□ -0.56
CDC42SE2Q9NRR3 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC11.56□□□□□ -0.56
CDC42SE2Q9NRR3 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
CDC42SE2Q9NRR3 FAM86EP-206ENST00000510506 987 ntBASIC11.56□□□□□ -0.56
CDC42SE2Q9NRR3 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC11.56□□□□□ -0.56
CDC42SE2Q9NRR3 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC11.56□□□□□ -0.56
CDC42SE2Q9NRR3 AP002414.4-201ENST00000589764 1148 ntBASIC11.56□□□□□ -0.56
CDC42SE2Q9NRR3 IL11-204ENST00000590625 1028 ntTSL 2 BASIC11.56□□□□□ -0.56
CDC42SE2Q9NRR3 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
CDC42SE2Q9NRR3 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
CDC42SE2Q9NRR3 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
CDC42SE2Q9NRR3 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC11.56□□□□□ -0.56
CDC42SE2Q9NRR3 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC11.56□□□□□ -0.56
CDC42SE2Q9NRR3 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC11.56□□□□□ -0.56
CDC42SE2Q9NRR3 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
CDC42SE2Q9NRR3 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC11.56□□□□□ -0.56
CDC42SE2Q9NRR3 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
CDC42SE2Q9NRR3 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
CDC42SE2Q9NRR3 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC11.56□□□□□ -0.56
CDC42SE2Q9NRR3 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
CDC42SE2Q9NRR3 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
CDC42SE2Q9NRR3 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
CDC42SE2Q9NRR3 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
CDC42SE2Q9NRR3 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
CDC42SE2Q9NRR3 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
CDC42SE2Q9NRR3 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
CDC42SE2Q9NRR3 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
CDC42SE2Q9NRR3 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
CDC42SE2Q9NRR3 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC11.55□□□□□ -0.56
CDC42SE2Q9NRR3 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
CDC42SE2Q9NRR3 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
CDC42SE2Q9NRR3 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC11.55□□□□□ -0.56
CDC42SE2Q9NRR3 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC11.55□□□□□ -0.56
CDC42SE2Q9NRR3 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC11.55□□□□□ -0.56
CDC42SE2Q9NRR3 TOP3BP1-201ENST00000420768 1380 ntBASIC11.55□□□□□ -0.56
CDC42SE2Q9NRR3 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC11.55□□□□□ -0.56
CDC42SE2Q9NRR3 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
CDC42SE2Q9NRR3 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC11.55□□□□□ -0.56
CDC42SE2Q9NRR3 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
CDC42SE2Q9NRR3 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
CDC42SE2Q9NRR3 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC11.55□□□□□ -0.56
CDC42SE2Q9NRR3 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
CDC42SE2Q9NRR3 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC11.55□□□□□ -0.56
CDC42SE2Q9NRR3 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC11.55□□□□□ -0.56
CDC42SE2Q9NRR3 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
CDC42SE2Q9NRR3 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
CDC42SE2Q9NRR3 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC11.55□□□□□ -0.56
CDC42SE2Q9NRR3 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC11.55□□□□□ -0.56
CDC42SE2Q9NRR3 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
CDC42SE2Q9NRR3 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC11.55□□□□□ -0.56
CDC42SE2Q9NRR3 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
CDC42SE2Q9NRR3 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms