Protein–RNA interactions for Protein: Q9NQ40

SLC52A3, Solute carrier family 52, riboflavin transporter, member 3, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A3Q9NQ40 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
SLC52A3Q9NQ40 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SLC52A3Q9NQ40 EMD-201ENST00000369835 966 ntTSL 3 BASIC15.83■□□□□ 0.12
SLC52A3Q9NQ40 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC15.83■□□□□ 0.12
SLC52A3Q9NQ40 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
SLC52A3Q9NQ40 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
SLC52A3Q9NQ40 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC15.83■□□□□ 0.12
SLC52A3Q9NQ40 KRT16P4-201ENST00000453883 522 ntBASIC15.83■□□□□ 0.12
SLC52A3Q9NQ40 AC107918.2-201ENST00000530817 355 ntBASIC15.83■□□□□ 0.12
SLC52A3Q9NQ40 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
SLC52A3Q9NQ40 AC004706.3-202ENST00000621574 984 ntBASIC15.83■□□□□ 0.12
SLC52A3Q9NQ40 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC15.83■□□□□ 0.12
SLC52A3Q9NQ40 AF228730.7-201ENST00000641842 219 ntBASIC15.83■□□□□ 0.12
SLC52A3Q9NQ40 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC15.83■□□□□ 0.12
SLC52A3Q9NQ40 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
SLC52A3Q9NQ40 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC15.83■□□□□ 0.12
SLC52A3Q9NQ40 AC013268.4-201ENST00000637413 2228 ntBASIC15.83■□□□□ 0.12
SLC52A3Q9NQ40 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC15.83■□□□□ 0.12
SLC52A3Q9NQ40 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
SLC52A3Q9NQ40 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SLC52A3Q9NQ40 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC15.82■□□□□ 0.12
SLC52A3Q9NQ40 AC144831.1-201ENST00000573312 2656 ntBASIC15.82■□□□□ 0.12
SLC52A3Q9NQ40 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
SLC52A3Q9NQ40 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
SLC52A3Q9NQ40 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SLC52A3Q9NQ40 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC15.82■□□□□ 0.12
SLC52A3Q9NQ40 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC15.82■□□□□ 0.12
SLC52A3Q9NQ40 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
SLC52A3Q9NQ40 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SLC52A3Q9NQ40 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SLC52A3Q9NQ40 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
SLC52A3Q9NQ40 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC15.82■□□□□ 0.12
SLC52A3Q9NQ40 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SLC52A3Q9NQ40 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SLC52A3Q9NQ40 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SLC52A3Q9NQ40 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SLC52A3Q9NQ40 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC15.82■□□□□ 0.12
SLC52A3Q9NQ40 PTCHD3P3-201ENST00000403073 906 ntBASIC15.82■□□□□ 0.12
SLC52A3Q9NQ40 ATP5G2P1-201ENST00000433580 426 ntBASIC15.82■□□□□ 0.12
SLC52A3Q9NQ40 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SLC52A3Q9NQ40 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
SLC52A3Q9NQ40 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC15.82■□□□□ 0.12
SLC52A3Q9NQ40 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
SLC52A3Q9NQ40 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC15.82■□□□□ 0.12
SLC52A3Q9NQ40 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
SLC52A3Q9NQ40 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC15.82■□□□□ 0.12
SLC52A3Q9NQ40 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SLC52A3Q9NQ40 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SLC52A3Q9NQ40 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SLC52A3Q9NQ40 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
SLC52A3Q9NQ40 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
SLC52A3Q9NQ40 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SLC52A3Q9NQ40 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SLC52A3Q9NQ40 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SLC52A3Q9NQ40 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC15.82■□□□□ 0.12
SLC52A3Q9NQ40 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC15.82■□□□□ 0.12
SLC52A3Q9NQ40 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
SLC52A3Q9NQ40 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
SLC52A3Q9NQ40 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SLC52A3Q9NQ40 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
SLC52A3Q9NQ40 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
SLC52A3Q9NQ40 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
SLC52A3Q9NQ40 MST1L-201ENST00000442552 2185 ntBASIC15.82■□□□□ 0.12
SLC52A3Q9NQ40 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SLC52A3Q9NQ40 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC15.82■□□□□ 0.12
SLC52A3Q9NQ40 AL513477.1-201ENST00000602865 2407 ntBASIC15.82■□□□□ 0.12
SLC52A3Q9NQ40 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
SLC52A3Q9NQ40 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SLC52A3Q9NQ40 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC15.81■□□□□ 0.12
SLC52A3Q9NQ40 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SLC52A3Q9NQ40 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SLC52A3Q9NQ40 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC15.81■□□□□ 0.12
SLC52A3Q9NQ40 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
SLC52A3Q9NQ40 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
SLC52A3Q9NQ40 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SLC52A3Q9NQ40 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC15.81■□□□□ 0.12
SLC52A3Q9NQ40 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
SLC52A3Q9NQ40 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SLC52A3Q9NQ40 COPS8-203ENST00000409334 794 ntTSL 5 BASIC15.81■□□□□ 0.12
SLC52A3Q9NQ40 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SLC52A3Q9NQ40 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SLC52A3Q9NQ40 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SLC52A3Q9NQ40 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC15.81■□□□□ 0.12
SLC52A3Q9NQ40 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC15.81■□□□□ 0.12
SLC52A3Q9NQ40 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
SLC52A3Q9NQ40 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC15.81■□□□□ 0.12
SLC52A3Q9NQ40 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC15.81■□□□□ 0.12
SLC52A3Q9NQ40 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC15.81■□□□□ 0.12
SLC52A3Q9NQ40 DBP-204ENST00000599385 709 ntTSL 3 BASIC15.81■□□□□ 0.12
SLC52A3Q9NQ40 AC016027.1-202ENST00000607927 1699 ntBASIC15.81■□□□□ 0.12
SLC52A3Q9NQ40 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC15.81■□□□□ 0.12
SLC52A3Q9NQ40 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC15.81■□□□□ 0.12
SLC52A3Q9NQ40 AL139288.1-201ENST00000623748 933 ntBASIC15.81■□□□□ 0.12
SLC52A3Q9NQ40 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC15.81■□□□□ 0.12
SLC52A3Q9NQ40 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
SLC52A3Q9NQ40 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC15.81■□□□□ 0.12
SLC52A3Q9NQ40 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
SLC52A3Q9NQ40 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SLC52A3Q9NQ40 HYMAI-201ENST00000635591 3347 ntBASIC15.81■□□□□ 0.12
SLC52A3Q9NQ40 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms