Protein–RNA interactions for Protein: Q9HCJ6

VAT1L, Synaptic vesicle membrane protein VAT-1 homolog-like, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1LQ9HCJ6 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
VAT1LQ9HCJ6 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC19.37■□□□□ 0.69
VAT1LQ9HCJ6 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC19.36■□□□□ 0.69
VAT1LQ9HCJ6 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
VAT1LQ9HCJ6 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
VAT1LQ9HCJ6 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
VAT1LQ9HCJ6 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
VAT1LQ9HCJ6 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC19.36■□□□□ 0.69
VAT1LQ9HCJ6 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
VAT1LQ9HCJ6 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC19.36■□□□□ 0.69
VAT1LQ9HCJ6 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
VAT1LQ9HCJ6 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
VAT1LQ9HCJ6 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
VAT1LQ9HCJ6 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
VAT1LQ9HCJ6 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC19.36■□□□□ 0.69
VAT1LQ9HCJ6 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
VAT1LQ9HCJ6 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
VAT1LQ9HCJ6 AC004461.1-201ENST00000412461 403 ntBASIC19.36■□□□□ 0.69
VAT1LQ9HCJ6 STARD13-205ENST00000439831 945 ntTSL 2 BASIC19.36■□□□□ 0.69
VAT1LQ9HCJ6 URGCP-206ENST00000446958 365 ntTSL 2 BASIC19.36■□□□□ 0.69
VAT1LQ9HCJ6 SPDYE11-202ENST00000450699 704 ntBASIC19.36■□□□□ 0.69
VAT1LQ9HCJ6 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
VAT1LQ9HCJ6 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
VAT1LQ9HCJ6 SPDYE9P-201ENST00000570642 692 ntBASIC19.36■□□□□ 0.69
VAT1LQ9HCJ6 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC19.36■□□□□ 0.69
VAT1LQ9HCJ6 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
VAT1LQ9HCJ6 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC19.36■□□□□ 0.69
VAT1LQ9HCJ6 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
VAT1LQ9HCJ6 SPDYE10P-202ENST00000612005 668 ntBASIC19.36■□□□□ 0.69
VAT1LQ9HCJ6 SPDYE8P-202ENST00000612377 668 ntBASIC19.36■□□□□ 0.69
VAT1LQ9HCJ6 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
VAT1LQ9HCJ6 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
VAT1LQ9HCJ6 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
VAT1LQ9HCJ6 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC19.36■□□□□ 0.69
VAT1LQ9HCJ6 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC19.36■□□□□ 0.69
VAT1LQ9HCJ6 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC19.36■□□□□ 0.69
VAT1LQ9HCJ6 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
VAT1LQ9HCJ6 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC19.36■□□□□ 0.69
VAT1LQ9HCJ6 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
VAT1LQ9HCJ6 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC19.36■□□□□ 0.69
VAT1LQ9HCJ6 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
VAT1LQ9HCJ6 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC19.36■□□□□ 0.69
VAT1LQ9HCJ6 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC19.36■□□□□ 0.69
VAT1LQ9HCJ6 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
VAT1LQ9HCJ6 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC19.35■□□□□ 0.69
VAT1LQ9HCJ6 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC19.35■□□□□ 0.69
VAT1LQ9HCJ6 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
VAT1LQ9HCJ6 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC19.35■□□□□ 0.69
VAT1LQ9HCJ6 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
VAT1LQ9HCJ6 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
VAT1LQ9HCJ6 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
VAT1LQ9HCJ6 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
VAT1LQ9HCJ6 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
VAT1LQ9HCJ6 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
VAT1LQ9HCJ6 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
VAT1LQ9HCJ6 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
VAT1LQ9HCJ6 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
VAT1LQ9HCJ6 PMS2P4-201ENST00000412466 1052 ntBASIC19.35■□□□□ 0.69
VAT1LQ9HCJ6 ADH5P3-201ENST00000433842 1137 ntBASIC19.35■□□□□ 0.69
VAT1LQ9HCJ6 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC19.35■□□□□ 0.69
VAT1LQ9HCJ6 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC19.35■□□□□ 0.69
VAT1LQ9HCJ6 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
VAT1LQ9HCJ6 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC19.35■□□□□ 0.69
VAT1LQ9HCJ6 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC19.35■□□□□ 0.69
VAT1LQ9HCJ6 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC19.35■□□□□ 0.69
VAT1LQ9HCJ6 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
VAT1LQ9HCJ6 AC013467.2-201ENST00000605472 835 ntBASIC19.35■□□□□ 0.69
VAT1LQ9HCJ6 AL161645.1-201ENST00000622716 1255 ntBASIC19.35■□□□□ 0.69
VAT1LQ9HCJ6 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
VAT1LQ9HCJ6 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
VAT1LQ9HCJ6 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
VAT1LQ9HCJ6 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC19.35■□□□□ 0.69
VAT1LQ9HCJ6 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
VAT1LQ9HCJ6 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC19.35■□□□□ 0.69
VAT1LQ9HCJ6 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
VAT1LQ9HCJ6 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
VAT1LQ9HCJ6 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC19.35■□□□□ 0.69
VAT1LQ9HCJ6 AC079328.2-201ENST00000561241 3354 ntBASIC19.35■□□□□ 0.69
VAT1LQ9HCJ6 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
VAT1LQ9HCJ6 SNX33P1-201ENST00000592116 1762 ntBASIC19.34■□□□□ 0.69
VAT1LQ9HCJ6 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
VAT1LQ9HCJ6 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC19.34■□□□□ 0.69
VAT1LQ9HCJ6 GCK-202ENST00000345378 2421 ntTSL 2 BASIC19.34■□□□□ 0.69
VAT1LQ9HCJ6 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
VAT1LQ9HCJ6 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC19.34■□□□□ 0.69
VAT1LQ9HCJ6 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
VAT1LQ9HCJ6 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC19.34■□□□□ 0.69
VAT1LQ9HCJ6 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
VAT1LQ9HCJ6 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
VAT1LQ9HCJ6 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
VAT1LQ9HCJ6 LINC00895-201ENST00000629028 1637 ntBASIC19.34■□□□□ 0.69
VAT1LQ9HCJ6 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC19.34■□□□□ 0.69
VAT1LQ9HCJ6 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
VAT1LQ9HCJ6 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
VAT1LQ9HCJ6 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
VAT1LQ9HCJ6 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
VAT1LQ9HCJ6 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
VAT1LQ9HCJ6 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC19.34■□□□□ 0.69
VAT1LQ9HCJ6 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
VAT1LQ9HCJ6 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC19.34■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms