Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
SND1-IT1Q9HBX3 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
SND1-IT1Q9HBX3 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SND1-IT1Q9HBX3 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SND1-IT1Q9HBX3 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
SND1-IT1Q9HBX3 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
SND1-IT1Q9HBX3 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC11.28□□□□□ -0.6
SND1-IT1Q9HBX3 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC11.28□□□□□ -0.6
SND1-IT1Q9HBX3 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
SND1-IT1Q9HBX3 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SND1-IT1Q9HBX3 LINC01568-207ENST00000641790 1380 ntBASIC11.28□□□□□ -0.6
SND1-IT1Q9HBX3 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC11.28□□□□□ -0.6
SND1-IT1Q9HBX3 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
SND1-IT1Q9HBX3 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC11.27□□□□□ -0.6
SND1-IT1Q9HBX3 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC11.27□□□□□ -0.6
SND1-IT1Q9HBX3 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC11.27□□□□□ -0.6
SND1-IT1Q9HBX3 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
SND1-IT1Q9HBX3 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC11.27□□□□□ -0.6
SND1-IT1Q9HBX3 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
SND1-IT1Q9HBX3 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
SND1-IT1Q9HBX3 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.6
SND1-IT1Q9HBX3 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
SND1-IT1Q9HBX3 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
SND1-IT1Q9HBX3 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC11.27□□□□□ -0.61
SND1-IT1Q9HBX3 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
SND1-IT1Q9HBX3 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
SND1-IT1Q9HBX3 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
SND1-IT1Q9HBX3 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
SND1-IT1Q9HBX3 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.61
SND1-IT1Q9HBX3 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC11.27□□□□□ -0.61
SND1-IT1Q9HBX3 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
SND1-IT1Q9HBX3 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
SND1-IT1Q9HBX3 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
SND1-IT1Q9HBX3 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC11.27□□□□□ -0.61
SND1-IT1Q9HBX3 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC11.27□□□□□ -0.61
SND1-IT1Q9HBX3 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC11.27□□□□□ -0.61
SND1-IT1Q9HBX3 NAA38-203ENST00000575071 553 ntTSL 2 BASIC11.27□□□□□ -0.61
SND1-IT1Q9HBX3 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC11.27□□□□□ -0.61
SND1-IT1Q9HBX3 GPR32P1-201ENST00000601788 811 ntBASIC11.27□□□□□ -0.61
SND1-IT1Q9HBX3 AC019129.2-201ENST00000609837 1235 ntBASIC11.27□□□□□ -0.61
SND1-IT1Q9HBX3 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
SND1-IT1Q9HBX3 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC11.27□□□□□ -0.61
SND1-IT1Q9HBX3 AL031432.5-201ENST00000641059 760 ntBASIC11.27□□□□□ -0.61
SND1-IT1Q9HBX3 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
SND1-IT1Q9HBX3 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
SND1-IT1Q9HBX3 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC11.27□□□□□ -0.61
SND1-IT1Q9HBX3 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC11.27□□□□□ -0.61
SND1-IT1Q9HBX3 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
SND1-IT1Q9HBX3 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
SND1-IT1Q9HBX3 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC11.27□□□□□ -0.61
SND1-IT1Q9HBX3 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
SND1-IT1Q9HBX3 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
SND1-IT1Q9HBX3 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
SND1-IT1Q9HBX3 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC11.27□□□□□ -0.61
SND1-IT1Q9HBX3 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
SND1-IT1Q9HBX3 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
SND1-IT1Q9HBX3 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
SND1-IT1Q9HBX3 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
SND1-IT1Q9HBX3 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
SND1-IT1Q9HBX3 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
SND1-IT1Q9HBX3 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
SND1-IT1Q9HBX3 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
SND1-IT1Q9HBX3 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
SND1-IT1Q9HBX3 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
SND1-IT1Q9HBX3 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
SND1-IT1Q9HBX3 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
SND1-IT1Q9HBX3 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
SND1-IT1Q9HBX3 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
SND1-IT1Q9HBX3 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
SND1-IT1Q9HBX3 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
SND1-IT1Q9HBX3 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
SND1-IT1Q9HBX3 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC11.26□□□□□ -0.61
SND1-IT1Q9HBX3 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC11.26□□□□□ -0.61
SND1-IT1Q9HBX3 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
SND1-IT1Q9HBX3 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
SND1-IT1Q9HBX3 AL136379.1-201ENST00000623471 2642 ntBASIC11.26□□□□□ -0.61
SND1-IT1Q9HBX3 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
SND1-IT1Q9HBX3 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
SND1-IT1Q9HBX3 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
SND1-IT1Q9HBX3 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
SND1-IT1Q9HBX3 AC144831.1-201ENST00000573312 2656 ntBASIC11.26□□□□□ -0.61
SND1-IT1Q9HBX3 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC11.26□□□□□ -0.61
SND1-IT1Q9HBX3 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
SND1-IT1Q9HBX3 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
SND1-IT1Q9HBX3 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
SND1-IT1Q9HBX3 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC11.26□□□□□ -0.61
SND1-IT1Q9HBX3 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC11.26□□□□□ -0.61
SND1-IT1Q9HBX3 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC11.26□□□□□ -0.61
SND1-IT1Q9HBX3 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
SND1-IT1Q9HBX3 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
SND1-IT1Q9HBX3 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC11.26□□□□□ -0.61
SND1-IT1Q9HBX3 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
SND1-IT1Q9HBX3 ANKRD20A18P-201ENST00000359341 492 ntBASIC11.26□□□□□ -0.61
SND1-IT1Q9HBX3 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC11.26□□□□□ -0.61
SND1-IT1Q9HBX3 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
SND1-IT1Q9HBX3 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC11.26□□□□□ -0.61
SND1-IT1Q9HBX3 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC11.26□□□□□ -0.61
SND1-IT1Q9HBX3 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
SND1-IT1Q9HBX3 TSPY15P-201ENST00000457163 923 ntBASIC11.26□□□□□ -0.61
SND1-IT1Q9HBX3 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC11.26□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms