Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
NXF3Q9H4D5 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
NXF3Q9H4D5 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
NXF3Q9H4D5 LETM1P2-201ENST00000597330 2178 ntBASIC17.99■□□□□ 0.47
NXF3Q9H4D5 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC17.99■□□□□ 0.47
NXF3Q9H4D5 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
NXF3Q9H4D5 WDR53-203ENST00000429115 683 ntTSL 2 BASIC17.99■□□□□ 0.47
NXF3Q9H4D5 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC17.99■□□□□ 0.47
NXF3Q9H4D5 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC17.99■□□□□ 0.47
NXF3Q9H4D5 KLF2P3-201ENST00000451977 1087 ntBASIC17.99■□□□□ 0.47
NXF3Q9H4D5 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
NXF3Q9H4D5 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC17.99■□□□□ 0.47
NXF3Q9H4D5 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC17.99■□□□□ 0.47
NXF3Q9H4D5 AP002490.2-201ENST00000524791 560 ntBASIC17.99■□□□□ 0.47
NXF3Q9H4D5 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC17.99■□□□□ 0.47
NXF3Q9H4D5 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
NXF3Q9H4D5 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
NXF3Q9H4D5 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC17.99■□□□□ 0.47
NXF3Q9H4D5 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC17.99■□□□□ 0.47
NXF3Q9H4D5 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
NXF3Q9H4D5 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
NXF3Q9H4D5 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
NXF3Q9H4D5 AC073439.1-201ENST00000624121 1774 ntBASIC17.99■□□□□ 0.47
NXF3Q9H4D5 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
NXF3Q9H4D5 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC17.99■□□□□ 0.47
NXF3Q9H4D5 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
NXF3Q9H4D5 AL603756.1-201ENST00000606511 2163 ntBASIC17.98■□□□□ 0.47
NXF3Q9H4D5 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC17.98■□□□□ 0.47
NXF3Q9H4D5 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
NXF3Q9H4D5 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC17.98■□□□□ 0.47
NXF3Q9H4D5 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC17.98■□□□□ 0.47
NXF3Q9H4D5 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC17.98■□□□□ 0.47
NXF3Q9H4D5 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC17.98■□□□□ 0.47
NXF3Q9H4D5 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NXF3Q9H4D5 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
NXF3Q9H4D5 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NXF3Q9H4D5 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
NXF3Q9H4D5 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
NXF3Q9H4D5 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
NXF3Q9H4D5 DPM2-202ENST00000373110 738 ntTSL 2 BASIC17.98■□□□□ 0.47
NXF3Q9H4D5 WRB-204ENST00000398753 699 ntTSL 3 BASIC17.98■□□□□ 0.47
NXF3Q9H4D5 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC17.98■□□□□ 0.47
NXF3Q9H4D5 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
NXF3Q9H4D5 SPCS2P1-201ENST00000561636 679 ntBASIC17.98■□□□□ 0.47
NXF3Q9H4D5 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC17.98■□□□□ 0.47
NXF3Q9H4D5 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC17.98■□□□□ 0.47
NXF3Q9H4D5 RPS15-212ENST00000593052 629 ntTSL 2 BASIC17.98■□□□□ 0.47
NXF3Q9H4D5 AC011467.4-201ENST00000594891 528 ntBASIC17.98■□□□□ 0.47
NXF3Q9H4D5 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC17.98■□□□□ 0.47
NXF3Q9H4D5 AL139011.1-202ENST00000642063 584 ntBASIC17.98■□□□□ 0.47
NXF3Q9H4D5 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
NXF3Q9H4D5 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NXF3Q9H4D5 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
NXF3Q9H4D5 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC17.98■□□□□ 0.47
NXF3Q9H4D5 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NXF3Q9H4D5 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC17.98■□□□□ 0.47
NXF3Q9H4D5 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
NXF3Q9H4D5 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
NXF3Q9H4D5 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC17.98■□□□□ 0.47
NXF3Q9H4D5 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
NXF3Q9H4D5 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC17.98■□□□□ 0.47
NXF3Q9H4D5 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
NXF3Q9H4D5 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
NXF3Q9H4D5 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
NXF3Q9H4D5 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NXF3Q9H4D5 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC17.97■□□□□ 0.47
NXF3Q9H4D5 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NXF3Q9H4D5 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
NXF3Q9H4D5 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
NXF3Q9H4D5 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
NXF3Q9H4D5 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC17.97■□□□□ 0.47
NXF3Q9H4D5 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC17.97■□□□□ 0.47
NXF3Q9H4D5 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC17.97■□□□□ 0.47
NXF3Q9H4D5 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC17.97■□□□□ 0.47
NXF3Q9H4D5 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC17.97■□□□□ 0.47
NXF3Q9H4D5 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
NXF3Q9H4D5 AC105020.1-201ENST00000435356 2205 ntBASIC17.97■□□□□ 0.47
NXF3Q9H4D5 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC17.97■□□□□ 0.47
NXF3Q9H4D5 SPDYE7P-202ENST00000420373 878 ntBASIC17.97■□□□□ 0.47
NXF3Q9H4D5 AC107890.1-201ENST00000422478 521 ntBASIC17.97■□□□□ 0.47
NXF3Q9H4D5 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC17.97■□□□□ 0.47
NXF3Q9H4D5 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
NXF3Q9H4D5 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC17.97■□□□□ 0.47
NXF3Q9H4D5 PPP6R2P1-201ENST00000450880 1275 ntBASIC17.97■□□□□ 0.47
NXF3Q9H4D5 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC17.97■□□□□ 0.47
NXF3Q9H4D5 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC17.97■□□□□ 0.47
NXF3Q9H4D5 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC17.97■□□□□ 0.47
NXF3Q9H4D5 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC17.97■□□□□ 0.47
NXF3Q9H4D5 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC17.97■□□□□ 0.47
NXF3Q9H4D5 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NXF3Q9H4D5 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
NXF3Q9H4D5 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC17.97■□□□□ 0.47
NXF3Q9H4D5 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
NXF3Q9H4D5 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NXF3Q9H4D5 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NXF3Q9H4D5 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC17.97■□□□□ 0.47
NXF3Q9H4D5 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NXF3Q9H4D5 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NXF3Q9H4D5 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC17.97■□□□□ 0.47
NXF3Q9H4D5 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms