Protein–RNA interactions for Protein: Q9H239

MMP28, Matrix metalloproteinase-28, humanhuman

Predictions only

Length 520 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28Q9H239 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC14.85□□□□□ -0.03
MMP28Q9H239 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC14.85□□□□□ -0.03
MMP28Q9H239 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
MMP28Q9H239 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
MMP28Q9H239 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
MMP28Q9H239 AL031133.1-201ENST00000406807 723 ntBASIC14.85□□□□□ -0.03
MMP28Q9H239 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC14.85□□□□□ -0.03
MMP28Q9H239 ISCU-203ENST00000431221 799 ntTSL 2 BASIC14.85□□□□□ -0.03
MMP28Q9H239 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
MMP28Q9H239 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
MMP28Q9H239 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC14.85□□□□□ -0.03
MMP28Q9H239 CLN6-204ENST00000564752 900 ntTSL 3 BASIC14.85□□□□□ -0.03
MMP28Q9H239 FGF14-AS2-201ENST00000606448 1074 ntBASIC14.85□□□□□ -0.03
MMP28Q9H239 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC14.85□□□□□ -0.03
MMP28Q9H239 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
MMP28Q9H239 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
MMP28Q9H239 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
MMP28Q9H239 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC14.85□□□□□ -0.03
MMP28Q9H239 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
MMP28Q9H239 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC14.85□□□□□ -0.03
MMP28Q9H239 AL391807.1-203ENST00000604392 2365 ntBASIC14.85□□□□□ -0.03
MMP28Q9H239 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
MMP28Q9H239 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
MMP28Q9H239 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC14.85□□□□□ -0.03
MMP28Q9H239 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
MMP28Q9H239 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
MMP28Q9H239 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC14.85□□□□□ -0.03
MMP28Q9H239 AC138035.3-201ENST00000622706 2791 ntBASIC14.85□□□□□ -0.03
MMP28Q9H239 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
MMP28Q9H239 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC14.84□□□□□ -0.03
MMP28Q9H239 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
MMP28Q9H239 AC104581.4-201ENST00000623126 3052 ntBASIC14.84□□□□□ -0.03
MMP28Q9H239 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
MMP28Q9H239 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
MMP28Q9H239 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
MMP28Q9H239 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
MMP28Q9H239 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
MMP28Q9H239 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC14.84□□□□□ -0.03
MMP28Q9H239 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
MMP28Q9H239 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
MMP28Q9H239 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
MMP28Q9H239 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC14.84□□□□□ -0.03
MMP28Q9H239 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
MMP28Q9H239 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
MMP28Q9H239 AC022532.1-201ENST00000624563 1728 ntBASIC14.84□□□□□ -0.03
MMP28Q9H239 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
MMP28Q9H239 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC14.84□□□□□ -0.03
MMP28Q9H239 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
MMP28Q9H239 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
MMP28Q9H239 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
MMP28Q9H239 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC14.84□□□□□ -0.03
MMP28Q9H239 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
MMP28Q9H239 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC14.84□□□□□ -0.03
MMP28Q9H239 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
MMP28Q9H239 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC14.84□□□□□ -0.03
MMP28Q9H239 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC14.84□□□□□ -0.03
MMP28Q9H239 AC079602.3-201ENST00000623931 403 ntBASIC14.84□□□□□ -0.03
MMP28Q9H239 CICP4-201ENST00000447359 2812 ntBASIC14.84□□□□□ -0.03
MMP28Q9H239 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
MMP28Q9H239 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
MMP28Q9H239 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC14.84□□□□□ -0.03
MMP28Q9H239 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
MMP28Q9H239 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC14.84□□□□□ -0.03
MMP28Q9H239 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC14.84□□□□□ -0.03
MMP28Q9H239 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
MMP28Q9H239 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
MMP28Q9H239 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
MMP28Q9H239 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
MMP28Q9H239 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
MMP28Q9H239 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
MMP28Q9H239 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
MMP28Q9H239 AC010491.1-201ENST00000563101 2797 ntBASIC14.84□□□□□ -0.03
MMP28Q9H239 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC14.84□□□□□ -0.03
MMP28Q9H239 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
MMP28Q9H239 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
MMP28Q9H239 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
MMP28Q9H239 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
MMP28Q9H239 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
MMP28Q9H239 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
MMP28Q9H239 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
MMP28Q9H239 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
MMP28Q9H239 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
MMP28Q9H239 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
MMP28Q9H239 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC14.83□□□□□ -0.03
MMP28Q9H239 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
MMP28Q9H239 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
MMP28Q9H239 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
MMP28Q9H239 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
MMP28Q9H239 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
MMP28Q9H239 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC14.83□□□□□ -0.04
MMP28Q9H239 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC14.83□□□□□ -0.04
MMP28Q9H239 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC14.83□□□□□ -0.04
MMP28Q9H239 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
MMP28Q9H239 AC068587.6-202ENST00000641839 5619 ntBASIC14.83□□□□□ -0.04
MMP28Q9H239 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
MMP28Q9H239 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC14.83□□□□□ -0.04
MMP28Q9H239 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC14.83□□□□□ -0.04
MMP28Q9H239 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
MMP28Q9H239 HLA-F-220ENST00000434407 884 ntBASIC14.83□□□□□ -0.04
MMP28Q9H239 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms