Protein–RNA interactions for Protein: Q9BU61

NDUFAF3, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFAF3Q9BU61 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
NDUFAF3Q9BU61 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
NDUFAF3Q9BU61 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
NDUFAF3Q9BU61 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
NDUFAF3Q9BU61 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
NDUFAF3Q9BU61 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
NDUFAF3Q9BU61 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
NDUFAF3Q9BU61 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
NDUFAF3Q9BU61 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
NDUFAF3Q9BU61 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC13.03□□□□□ -0.32
NDUFAF3Q9BU61 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
NDUFAF3Q9BU61 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC13.03□□□□□ -0.32
NDUFAF3Q9BU61 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
NDUFAF3Q9BU61 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC13.03□□□□□ -0.32
NDUFAF3Q9BU61 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
NDUFAF3Q9BU61 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
NDUFAF3Q9BU61 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.32
NDUFAF3Q9BU61 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.32
NDUFAF3Q9BU61 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
NDUFAF3Q9BU61 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
NDUFAF3Q9BU61 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.32
NDUFAF3Q9BU61 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC13.02□□□□□ -0.32
NDUFAF3Q9BU61 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
NDUFAF3Q9BU61 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
NDUFAF3Q9BU61 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
NDUFAF3Q9BU61 AC060834.1-201ENST00000443027 2032 ntBASIC13.02□□□□□ -0.33
NDUFAF3Q9BU61 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
NDUFAF3Q9BU61 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
NDUFAF3Q9BU61 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
NDUFAF3Q9BU61 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
NDUFAF3Q9BU61 FXN-203ENST00000396366 922 ntTSL 2 BASIC13.02□□□□□ -0.33
NDUFAF3Q9BU61 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
NDUFAF3Q9BU61 KRT18P48-201ENST00000434763 852 ntBASIC13.02□□□□□ -0.33
NDUFAF3Q9BU61 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC13.02□□□□□ -0.33
NDUFAF3Q9BU61 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC13.02□□□□□ -0.33
NDUFAF3Q9BU61 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC13.02□□□□□ -0.33
NDUFAF3Q9BU61 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC13.02□□□□□ -0.33
NDUFAF3Q9BU61 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC13.02□□□□□ -0.33
NDUFAF3Q9BU61 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
NDUFAF3Q9BU61 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC13.02□□□□□ -0.33
NDUFAF3Q9BU61 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
NDUFAF3Q9BU61 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC13.02□□□□□ -0.33
NDUFAF3Q9BU61 AL355312.1-201ENST00000407115 2176 ntBASIC13.02□□□□□ -0.33
NDUFAF3Q9BU61 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC13.02□□□□□ -0.33
NDUFAF3Q9BU61 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC13.02□□□□□ -0.33
NDUFAF3Q9BU61 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
NDUFAF3Q9BU61 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
NDUFAF3Q9BU61 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
NDUFAF3Q9BU61 KRT89P-201ENST00000620027 1478 ntBASIC13.02□□□□□ -0.33
NDUFAF3Q9BU61 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
NDUFAF3Q9BU61 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
NDUFAF3Q9BU61 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.33
NDUFAF3Q9BU61 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC13.02□□□□□ -0.33
NDUFAF3Q9BU61 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
NDUFAF3Q9BU61 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
NDUFAF3Q9BU61 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
NDUFAF3Q9BU61 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
NDUFAF3Q9BU61 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
NDUFAF3Q9BU61 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
NDUFAF3Q9BU61 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
NDUFAF3Q9BU61 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
NDUFAF3Q9BU61 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NDUFAF3Q9BU61 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC13.01□□□□□ -0.33
NDUFAF3Q9BU61 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC13.01□□□□□ -0.33
NDUFAF3Q9BU61 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
NDUFAF3Q9BU61 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
NDUFAF3Q9BU61 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NDUFAF3Q9BU61 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
NDUFAF3Q9BU61 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
NDUFAF3Q9BU61 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
NDUFAF3Q9BU61 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC13.01□□□□□ -0.33
NDUFAF3Q9BU61 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
NDUFAF3Q9BU61 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
NDUFAF3Q9BU61 IPPK-202ENST00000375522 882 ntTSL 3 BASIC13.01□□□□□ -0.33
NDUFAF3Q9BU61 PVRIG2P-201ENST00000435460 978 ntBASIC13.01□□□□□ -0.33
NDUFAF3Q9BU61 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC13.01□□□□□ -0.33
NDUFAF3Q9BU61 SEC1P-202ENST00000473944 940 ntBASIC13.01□□□□□ -0.33
NDUFAF3Q9BU61 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC13.01□□□□□ -0.33
NDUFAF3Q9BU61 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC13.01□□□□□ -0.33
NDUFAF3Q9BU61 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC13.01□□□□□ -0.33
NDUFAF3Q9BU61 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC13.01□□□□□ -0.33
NDUFAF3Q9BU61 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC13.01□□□□□ -0.33
NDUFAF3Q9BU61 MIR3917-201ENST00000580971 93 ntBASIC13.01□□□□□ -0.33
NDUFAF3Q9BU61 NDUFV2-AS1-203ENST00000608008 779 ntBASIC13.01□□□□□ -0.33
NDUFAF3Q9BU61 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC13.01□□□□□ -0.33
NDUFAF3Q9BU61 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
NDUFAF3Q9BU61 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NDUFAF3Q9BU61 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
NDUFAF3Q9BU61 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NDUFAF3Q9BU61 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NDUFAF3Q9BU61 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NDUFAF3Q9BU61 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
NDUFAF3Q9BU61 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC13.01□□□□□ -0.33
NDUFAF3Q9BU61 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC13.01□□□□□ -0.33
NDUFAF3Q9BU61 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
NDUFAF3Q9BU61 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
NDUFAF3Q9BU61 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
NDUFAF3Q9BU61 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
NDUFAF3Q9BU61 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NDUFAF3Q9BU61 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms