Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC11.71□□□□□ -0.53
UPK3BQ9BT76 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC11.71□□□□□ -0.53
UPK3BQ9BT76 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC11.71□□□□□ -0.53
UPK3BQ9BT76 MIR3687-2-201ENST00000577708 61 ntBASIC11.71□□□□□ -0.53
UPK3BQ9BT76 MIR3687-1-201ENST00000614492 61 ntBASIC11.71□□□□□ -0.53
UPK3BQ9BT76 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
UPK3BQ9BT76 AC007064.4-201ENST00000637740 555 ntBASIC11.71□□□□□ -0.53
UPK3BQ9BT76 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
UPK3BQ9BT76 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC11.71□□□□□ -0.54
UPK3BQ9BT76 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
UPK3BQ9BT76 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
UPK3BQ9BT76 TK2-221ENST00000620035 5060 ntTSL 2 BASIC11.71□□□□□ -0.54
UPK3BQ9BT76 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
UPK3BQ9BT76 PCDH8P1-201ENST00000428983 2773 ntBASIC11.71□□□□□ -0.54
UPK3BQ9BT76 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.54
UPK3BQ9BT76 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
UPK3BQ9BT76 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
UPK3BQ9BT76 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC11.71□□□□□ -0.54
UPK3BQ9BT76 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC11.71□□□□□ -0.54
UPK3BQ9BT76 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC11.71□□□□□ -0.54
UPK3BQ9BT76 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC11.71□□□□□ -0.54
UPK3BQ9BT76 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
UPK3BQ9BT76 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC11.71□□□□□ -0.54
UPK3BQ9BT76 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC11.7□□□□□ -0.54
UPK3BQ9BT76 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
UPK3BQ9BT76 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
UPK3BQ9BT76 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
UPK3BQ9BT76 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC11.7□□□□□ -0.54
UPK3BQ9BT76 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
UPK3BQ9BT76 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC11.7□□□□□ -0.54
UPK3BQ9BT76 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
UPK3BQ9BT76 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
UPK3BQ9BT76 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
UPK3BQ9BT76 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC11.7□□□□□ -0.54
UPK3BQ9BT76 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
UPK3BQ9BT76 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
UPK3BQ9BT76 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC11.7□□□□□ -0.54
UPK3BQ9BT76 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC11.7□□□□□ -0.54
UPK3BQ9BT76 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
UPK3BQ9BT76 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
UPK3BQ9BT76 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC11.7□□□□□ -0.54
UPK3BQ9BT76 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
UPK3BQ9BT76 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
UPK3BQ9BT76 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC11.7□□□□□ -0.54
UPK3BQ9BT76 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC11.7□□□□□ -0.54
UPK3BQ9BT76 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC11.7□□□□□ -0.54
UPK3BQ9BT76 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC11.7□□□□□ -0.54
UPK3BQ9BT76 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC11.7□□□□□ -0.54
UPK3BQ9BT76 CXCL1P1-201ENST00000502804 216 ntBASIC11.7□□□□□ -0.54
UPK3BQ9BT76 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC11.7□□□□□ -0.54
UPK3BQ9BT76 POLD4-207ENST00000531239 584 ntTSL 2 BASIC11.7□□□□□ -0.54
UPK3BQ9BT76 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC11.7□□□□□ -0.54
UPK3BQ9BT76 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC11.7□□□□□ -0.54
UPK3BQ9BT76 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
UPK3BQ9BT76 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC11.7□□□□□ -0.54
UPK3BQ9BT76 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC11.7□□□□□ -0.54
UPK3BQ9BT76 HOTTIP_1.1-201ENST00000620415 57 ntBASIC11.7□□□□□ -0.54
UPK3BQ9BT76 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC11.7□□□□□ -0.54
UPK3BQ9BT76 AC010507.1-201ENST00000633895 436 ntBASIC11.7□□□□□ -0.54
UPK3BQ9BT76 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC11.7□□□□□ -0.54
UPK3BQ9BT76 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
UPK3BQ9BT76 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
UPK3BQ9BT76 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC11.7□□□□□ -0.54
UPK3BQ9BT76 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
UPK3BQ9BT76 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
UPK3BQ9BT76 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
UPK3BQ9BT76 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC11.7□□□□□ -0.54
UPK3BQ9BT76 EGFEM1P-202ENST00000431685 1563 ntBASIC11.7□□□□□ -0.54
UPK3BQ9BT76 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
UPK3BQ9BT76 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
UPK3BQ9BT76 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
UPK3BQ9BT76 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
UPK3BQ9BT76 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
UPK3BQ9BT76 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
UPK3BQ9BT76 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
UPK3BQ9BT76 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
UPK3BQ9BT76 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
UPK3BQ9BT76 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
UPK3BQ9BT76 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC11.7□□□□□ -0.54
UPK3BQ9BT76 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC11.7□□□□□ -0.54
UPK3BQ9BT76 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC11.7□□□□□ -0.54
UPK3BQ9BT76 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC11.7□□□□□ -0.54
UPK3BQ9BT76 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
UPK3BQ9BT76 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
UPK3BQ9BT76 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC11.69□□□□□ -0.54
UPK3BQ9BT76 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
UPK3BQ9BT76 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC11.69□□□□□ -0.54
UPK3BQ9BT76 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC11.69□□□□□ -0.54
UPK3BQ9BT76 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC11.69□□□□□ -0.54
UPK3BQ9BT76 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
UPK3BQ9BT76 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
UPK3BQ9BT76 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
UPK3BQ9BT76 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC11.69□□□□□ -0.54
UPK3BQ9BT76 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC11.69□□□□□ -0.54
UPK3BQ9BT76 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
UPK3BQ9BT76 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
UPK3BQ9BT76 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
UPK3BQ9BT76 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
UPK3BQ9BT76 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
UPK3BQ9BT76 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 69.1 ms