Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 NMU-202ENST00000505262 693 ntTSL 3 BASIC14.11□□□□□ -0.15
PCGF1Q9BSM1 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC14.11□□□□□ -0.15
PCGF1Q9BSM1 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC14.11□□□□□ -0.15
PCGF1Q9BSM1 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC14.11□□□□□ -0.15
PCGF1Q9BSM1 CD63-210ENST00000550776 870 ntTSL 5 BASIC14.11□□□□□ -0.15
PCGF1Q9BSM1 AC040169.1-201ENST00000565382 521 ntBASIC14.11□□□□□ -0.15
PCGF1Q9BSM1 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
PCGF1Q9BSM1 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC14.11□□□□□ -0.15
PCGF1Q9BSM1 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
PCGF1Q9BSM1 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC14.11□□□□□ -0.15
PCGF1Q9BSM1 GPALPP1-207ENST00000611650 899 ntBASIC14.11□□□□□ -0.15
PCGF1Q9BSM1 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
PCGF1Q9BSM1 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC14.11□□□□□ -0.15
PCGF1Q9BSM1 ABR-203ENST00000536794 2213 ntTSL 2 BASIC14.11□□□□□ -0.15
PCGF1Q9BSM1 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
PCGF1Q9BSM1 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
PCGF1Q9BSM1 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC14.11□□□□□ -0.15
PCGF1Q9BSM1 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
PCGF1Q9BSM1 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
PCGF1Q9BSM1 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC14.11□□□□□ -0.15
PCGF1Q9BSM1 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PCGF1Q9BSM1 AL590787.1-201ENST00000568856 1315 ntBASIC14.11□□□□□ -0.15
PCGF1Q9BSM1 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PCGF1Q9BSM1 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
PCGF1Q9BSM1 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PCGF1Q9BSM1 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
PCGF1Q9BSM1 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
PCGF1Q9BSM1 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
PCGF1Q9BSM1 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PCGF1Q9BSM1 LINC00554-201ENST00000564841 3011 ntBASIC14.1□□□□□ -0.15
PCGF1Q9BSM1 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PCGF1Q9BSM1 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PCGF1Q9BSM1 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PCGF1Q9BSM1 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
PCGF1Q9BSM1 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC14.1□□□□□ -0.15
PCGF1Q9BSM1 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC14.1□□□□□ -0.15
PCGF1Q9BSM1 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PCGF1Q9BSM1 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PCGF1Q9BSM1 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
PCGF1Q9BSM1 AC103702.1-201ENST00000548801 2630 ntBASIC14.1□□□□□ -0.15
PCGF1Q9BSM1 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PCGF1Q9BSM1 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PCGF1Q9BSM1 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PCGF1Q9BSM1 AC023274.1-201ENST00000418278 595 ntBASIC14.1□□□□□ -0.15
PCGF1Q9BSM1 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC14.1□□□□□ -0.15
PCGF1Q9BSM1 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC14.1□□□□□ -0.15
PCGF1Q9BSM1 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC14.1□□□□□ -0.15
PCGF1Q9BSM1 VN2R19P-201ENST00000442399 1052 ntBASIC14.1□□□□□ -0.15
PCGF1Q9BSM1 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC14.1□□□□□ -0.15
PCGF1Q9BSM1 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC14.1□□□□□ -0.15
PCGF1Q9BSM1 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
PCGF1Q9BSM1 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC14.1□□□□□ -0.15
PCGF1Q9BSM1 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC14.1□□□□□ -0.15
PCGF1Q9BSM1 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC14.1□□□□□ -0.15
PCGF1Q9BSM1 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC14.1□□□□□ -0.15
PCGF1Q9BSM1 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
PCGF1Q9BSM1 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC14.1□□□□□ -0.15
PCGF1Q9BSM1 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PCGF1Q9BSM1 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PCGF1Q9BSM1 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PCGF1Q9BSM1 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
PCGF1Q9BSM1 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
PCGF1Q9BSM1 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PCGF1Q9BSM1 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PCGF1Q9BSM1 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
PCGF1Q9BSM1 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
PCGF1Q9BSM1 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
PCGF1Q9BSM1 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PCGF1Q9BSM1 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
PCGF1Q9BSM1 HYMAI-201ENST00000635591 3347 ntBASIC14.1□□□□□ -0.15
PCGF1Q9BSM1 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
PCGF1Q9BSM1 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
PCGF1Q9BSM1 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
PCGF1Q9BSM1 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PCGF1Q9BSM1 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
PCGF1Q9BSM1 FUK-207ENST00000571514 3054 ntTSL 2 BASIC14.09□□□□□ -0.15
PCGF1Q9BSM1 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC14.09□□□□□ -0.15
PCGF1Q9BSM1 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
PCGF1Q9BSM1 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
PCGF1Q9BSM1 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
PCGF1Q9BSM1 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
PCGF1Q9BSM1 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC14.09□□□□□ -0.15
PCGF1Q9BSM1 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
PCGF1Q9BSM1 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PCGF1Q9BSM1 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC14.09□□□□□ -0.15
PCGF1Q9BSM1 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
PCGF1Q9BSM1 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PCGF1Q9BSM1 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
PCGF1Q9BSM1 PKD1P5-201ENST00000532415 10291 ntBASIC14.09□□□□□ -0.15
PCGF1Q9BSM1 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
PCGF1Q9BSM1 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PCGF1Q9BSM1 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PCGF1Q9BSM1 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC14.09□□□□□ -0.15
PCGF1Q9BSM1 ATP6V0CP3-201ENST00000417255 467 ntBASIC14.09□□□□□ -0.15
PCGF1Q9BSM1 COX10-202ENST00000429152 875 ntTSL 2 BASIC14.09□□□□□ -0.15
PCGF1Q9BSM1 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
PCGF1Q9BSM1 PGAM5P1-201ENST00000518923 814 ntBASIC14.09□□□□□ -0.15
PCGF1Q9BSM1 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC14.09□□□□□ -0.15
PCGF1Q9BSM1 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC14.09□□□□□ -0.15
PCGF1Q9BSM1 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC14.09□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms