Protein–RNA interactions for Protein: Q9BQI6

SLF1, SMC5-SMC6 complex localization factor protein 1, humanhuman

Predictions only

Length 1,058 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLF1Q9BQI6 MIR3197-201ENST00000582241 73 ntBASIC19.42■□□□□ 0.7
SLF1Q9BQI6 CYP2A7P1-201ENST00000595391 815 ntBASIC19.42■□□□□ 0.7
SLF1Q9BQI6 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC19.42■□□□□ 0.7
SLF1Q9BQI6 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC19.42■□□□□ 0.7
SLF1Q9BQI6 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC19.42■□□□□ 0.7
SLF1Q9BQI6 AP001059.3-201ENST00000619053 235 ntBASIC19.42■□□□□ 0.7
SLF1Q9BQI6 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC19.42■□□□□ 0.7
SLF1Q9BQI6 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC19.42■□□□□ 0.7
SLF1Q9BQI6 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC19.42■□□□□ 0.7
SLF1Q9BQI6 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SLF1Q9BQI6 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC19.42■□□□□ 0.7
SLF1Q9BQI6 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
SLF1Q9BQI6 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SLF1Q9BQI6 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SLF1Q9BQI6 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC19.42■□□□□ 0.7
SLF1Q9BQI6 HR-201ENST00000312841 5351 ntTSL 5 BASIC19.42■□□□□ 0.7
SLF1Q9BQI6 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
SLF1Q9BQI6 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC19.42■□□□□ 0.7
SLF1Q9BQI6 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SLF1Q9BQI6 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC19.42■□□□□ 0.7
SLF1Q9BQI6 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC19.42■□□□□ 0.7
SLF1Q9BQI6 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SLF1Q9BQI6 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SLF1Q9BQI6 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SLF1Q9BQI6 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
SLF1Q9BQI6 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SLF1Q9BQI6 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
SLF1Q9BQI6 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
SLF1Q9BQI6 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
SLF1Q9BQI6 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SLF1Q9BQI6 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC19.41■□□□□ 0.7
SLF1Q9BQI6 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SLF1Q9BQI6 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
SLF1Q9BQI6 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SLF1Q9BQI6 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SLF1Q9BQI6 CD99-202ENST00000381180 530 ntTSL 2 BASIC19.41■□□□□ 0.7
SLF1Q9BQI6 CDK2AP2P3-201ENST00000422476 372 ntBASIC19.41■□□□□ 0.7
SLF1Q9BQI6 FAM8A3P-201ENST00000427218 844 ntBASIC19.41■□□□□ 0.7
SLF1Q9BQI6 RBPMS2P1-201ENST00000437762 623 ntBASIC19.41■□□□□ 0.7
SLF1Q9BQI6 CNN2P2-201ENST00000443536 909 ntBASIC19.41■□□□□ 0.7
SLF1Q9BQI6 CNN2P3-201ENST00000450201 906 ntBASIC19.41■□□□□ 0.7
SLF1Q9BQI6 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SLF1Q9BQI6 AL136317.3-201ENST00000618497 906 ntBASIC19.41■□□□□ 0.7
SLF1Q9BQI6 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC19.41■□□□□ 0.7
SLF1Q9BQI6 AC084121.4-201ENST00000641598 221 ntBASIC19.41■□□□□ 0.7
SLF1Q9BQI6 AF228730.8-201ENST00000642140 221 ntBASIC19.41■□□□□ 0.7
SLF1Q9BQI6 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SLF1Q9BQI6 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
SLF1Q9BQI6 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
SLF1Q9BQI6 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SLF1Q9BQI6 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SLF1Q9BQI6 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SLF1Q9BQI6 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
SLF1Q9BQI6 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SLF1Q9BQI6 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SLF1Q9BQI6 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC19.41■□□□□ 0.7
SLF1Q9BQI6 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
SLF1Q9BQI6 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SLF1Q9BQI6 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SLF1Q9BQI6 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC19.41■□□□□ 0.7
SLF1Q9BQI6 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SLF1Q9BQI6 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SLF1Q9BQI6 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC19.4■□□□□ 0.7
SLF1Q9BQI6 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC19.4■□□□□ 0.7
SLF1Q9BQI6 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC19.4■□□□□ 0.7
SLF1Q9BQI6 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SLF1Q9BQI6 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SLF1Q9BQI6 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
SLF1Q9BQI6 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC19.4■□□□□ 0.7
SLF1Q9BQI6 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SLF1Q9BQI6 AC016027.1-202ENST00000607927 1699 ntBASIC19.4■□□□□ 0.7
SLF1Q9BQI6 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SLF1Q9BQI6 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
SLF1Q9BQI6 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC19.4■□□□□ 0.7
SLF1Q9BQI6 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC19.4■□□□□ 0.7
SLF1Q9BQI6 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SLF1Q9BQI6 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SLF1Q9BQI6 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SLF1Q9BQI6 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SLF1Q9BQI6 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SLF1Q9BQI6 WDR53-203ENST00000429115 683 ntTSL 2 BASIC19.4■□□□□ 0.7
SLF1Q9BQI6 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC19.4■□□□□ 0.7
SLF1Q9BQI6 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
SLF1Q9BQI6 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC19.4■□□□□ 0.7
SLF1Q9BQI6 AC005498.2-205ENST00000593218 784 ntBASIC19.4■□□□□ 0.7
SLF1Q9BQI6 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SLF1Q9BQI6 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
SLF1Q9BQI6 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC19.4■□□□□ 0.7
SLF1Q9BQI6 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
SLF1Q9BQI6 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
SLF1Q9BQI6 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SLF1Q9BQI6 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC19.4■□□□□ 0.7
SLF1Q9BQI6 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SLF1Q9BQI6 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SLF1Q9BQI6 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SLF1Q9BQI6 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
SLF1Q9BQI6 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SLF1Q9BQI6 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC19.4■□□□□ 0.7
SLF1Q9BQI6 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
SLF1Q9BQI6 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms