Protein–RNA interactions for Protein: Q99608

NDN, Necdin, humanhuman

Predictions only

Length 321 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDNQ99608 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NDNQ99608 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
NDNQ99608 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
NDNQ99608 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC16.85■□□□□ 0.29
NDNQ99608 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NDNQ99608 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NDNQ99608 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
NDNQ99608 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NDNQ99608 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
NDNQ99608 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NDNQ99608 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
NDNQ99608 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
NDNQ99608 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NDNQ99608 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC16.84■□□□□ 0.29
NDNQ99608 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
NDNQ99608 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NDNQ99608 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC16.84■□□□□ 0.29
NDNQ99608 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
NDNQ99608 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
NDNQ99608 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NDNQ99608 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC16.84■□□□□ 0.29
NDNQ99608 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC16.84■□□□□ 0.29
NDNQ99608 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC16.84■□□□□ 0.29
NDNQ99608 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC16.84■□□□□ 0.29
NDNQ99608 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
NDNQ99608 SAPCD2P3-201ENST00000455031 850 ntBASIC16.84■□□□□ 0.29
NDNQ99608 AP002490.2-201ENST00000524791 560 ntBASIC16.84■□□□□ 0.29
NDNQ99608 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC16.84■□□□□ 0.29
NDNQ99608 IFNL4P1-201ENST00000607083 540 ntBASIC16.84■□□□□ 0.29
NDNQ99608 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NDNQ99608 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC16.84■□□□□ 0.29
NDNQ99608 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
NDNQ99608 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NDNQ99608 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NDNQ99608 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NDNQ99608 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NDNQ99608 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NDNQ99608 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NDNQ99608 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NDNQ99608 PC-204ENST00000524491 1714 ntTSL 2 BASIC16.84■□□□□ 0.29
NDNQ99608 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC16.84■□□□□ 0.29
NDNQ99608 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
NDNQ99608 AMT-206ENST00000458307 1860 ntTSL 2 BASIC16.84■□□□□ 0.29
NDNQ99608 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
NDNQ99608 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
NDNQ99608 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
NDNQ99608 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC16.84■□□□□ 0.29
NDNQ99608 AC092364.2-201ENST00000596710 2692 ntBASIC16.83■□□□□ 0.29
NDNQ99608 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC16.83■□□□□ 0.29
NDNQ99608 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
NDNQ99608 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
NDNQ99608 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NDNQ99608 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
NDNQ99608 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
NDNQ99608 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
NDNQ99608 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
NDNQ99608 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
NDNQ99608 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
NDNQ99608 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
NDNQ99608 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NDNQ99608 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC16.83■□□□□ 0.28
NDNQ99608 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
NDNQ99608 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
NDNQ99608 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
NDNQ99608 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC16.83■□□□□ 0.28
NDNQ99608 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NDNQ99608 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC16.83■□□□□ 0.28
NDNQ99608 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC16.83■□□□□ 0.28
NDNQ99608 MSRA-206ENST00000521209 814 ntTSL 3 BASIC16.83■□□□□ 0.28
NDNQ99608 SDHD-206ENST00000528182 754 ntTSL 3 BASIC16.83■□□□□ 0.28
NDNQ99608 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
NDNQ99608 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
NDNQ99608 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC16.83■□□□□ 0.28
NDNQ99608 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
NDNQ99608 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
NDNQ99608 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC16.83■□□□□ 0.28
NDNQ99608 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC16.83■□□□□ 0.28
NDNQ99608 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC16.83■□□□□ 0.28
NDNQ99608 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC16.83■□□□□ 0.28
NDNQ99608 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC16.83■□□□□ 0.28
NDNQ99608 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
NDNQ99608 AC021087.4-201ENST00000563761 564 ntBASIC16.83■□□□□ 0.28
NDNQ99608 AC139887.3-201ENST00000568585 713 ntBASIC16.83■□□□□ 0.28
NDNQ99608 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
NDNQ99608 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC16.83■□□□□ 0.28
NDNQ99608 KRT8P49-201ENST00000604166 1432 ntBASIC16.83■□□□□ 0.28
NDNQ99608 AC025062.2-201ENST00000605477 670 ntBASIC16.83■□□□□ 0.28
NDNQ99608 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NDNQ99608 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NDNQ99608 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC16.83■□□□□ 0.28
NDNQ99608 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC16.83■□□□□ 0.28
NDNQ99608 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC16.83■□□□□ 0.28
NDNQ99608 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
NDNQ99608 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
NDNQ99608 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
NDNQ99608 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
NDNQ99608 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NDNQ99608 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
NDNQ99608 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
NDNQ99608 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms