Protein–RNA interactions for Protein: Q99466

NOTCH4, Neurogenic locus notch homolog protein 4, humanhuman

Predictions only

Length 2,003 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH4Q99466 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NOTCH4Q99466 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NOTCH4Q99466 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
NOTCH4Q99466 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC17■□□□□ 0.31
NOTCH4Q99466 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
NOTCH4Q99466 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC17■□□□□ 0.31
NOTCH4Q99466 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC17■□□□□ 0.31
NOTCH4Q99466 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NOTCH4Q99466 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC17■□□□□ 0.31
NOTCH4Q99466 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC17■□□□□ 0.31
NOTCH4Q99466 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
NOTCH4Q99466 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
NOTCH4Q99466 MIR1909-201ENST00000411312 80 ntBASIC17■□□□□ 0.31
NOTCH4Q99466 HLA-V-201ENST00000429037 534 ntBASIC17■□□□□ 0.31
NOTCH4Q99466 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC17■□□□□ 0.31
NOTCH4Q99466 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC17■□□□□ 0.31
NOTCH4Q99466 SRD5A3P1-201ENST00000603021 949 ntBASIC17■□□□□ 0.31
NOTCH4Q99466 EML3-217ENST00000531557 2509 ntTSL 5 BASIC17■□□□□ 0.31
NOTCH4Q99466 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NOTCH4Q99466 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC17■□□□□ 0.31
NOTCH4Q99466 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC17■□□□□ 0.31
NOTCH4Q99466 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
NOTCH4Q99466 AL589702.1-201ENST00000641229 1509 ntBASIC17■□□□□ 0.31
NOTCH4Q99466 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC17■□□□□ 0.31
NOTCH4Q99466 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NOTCH4Q99466 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
NOTCH4Q99466 AC138969.3-201ENST00000546612 1459 ntBASIC17■□□□□ 0.31
NOTCH4Q99466 AC138932.2-201ENST00000548268 1459 ntBASIC17■□□□□ 0.31
NOTCH4Q99466 AC126755.4-201ENST00000549796 1459 ntBASIC17■□□□□ 0.31
NOTCH4Q99466 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NOTCH4Q99466 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC17■□□□□ 0.31
NOTCH4Q99466 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC17■□□□□ 0.31
NOTCH4Q99466 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
NOTCH4Q99466 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
NOTCH4Q99466 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
NOTCH4Q99466 AP006294.1-201ENST00000415407 339 ntBASIC16.99■□□□□ 0.31
NOTCH4Q99466 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC16.99■□□□□ 0.31
NOTCH4Q99466 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
NOTCH4Q99466 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
NOTCH4Q99466 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
NOTCH4Q99466 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
NOTCH4Q99466 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
NOTCH4Q99466 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
NOTCH4Q99466 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
NOTCH4Q99466 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
NOTCH4Q99466 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
NOTCH4Q99466 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
NOTCH4Q99466 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC16.99■□□□□ 0.31
NOTCH4Q99466 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
NOTCH4Q99466 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
NOTCH4Q99466 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
NOTCH4Q99466 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC16.99■□□□□ 0.31
NOTCH4Q99466 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC16.99■□□□□ 0.31
NOTCH4Q99466 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
NOTCH4Q99466 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
NOTCH4Q99466 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC16.99■□□□□ 0.31
NOTCH4Q99466 ATP5G2P4-201ENST00000442175 420 ntBASIC16.99■□□□□ 0.31
NOTCH4Q99466 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC16.99■□□□□ 0.31
NOTCH4Q99466 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
NOTCH4Q99466 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC16.99■□□□□ 0.31
NOTCH4Q99466 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
NOTCH4Q99466 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC16.99■□□□□ 0.31
NOTCH4Q99466 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC16.99■□□□□ 0.31
NOTCH4Q99466 AL033527.5-202ENST00000641632 1098 ntBASIC16.99■□□□□ 0.31
NOTCH4Q99466 AL109936.8-201ENST00000641772 604 ntBASIC16.99■□□□□ 0.31
NOTCH4Q99466 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
NOTCH4Q99466 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
NOTCH4Q99466 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
NOTCH4Q99466 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC16.99■□□□□ 0.31
NOTCH4Q99466 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
NOTCH4Q99466 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
NOTCH4Q99466 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
NOTCH4Q99466 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC16.98■□□□□ 0.31
NOTCH4Q99466 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
NOTCH4Q99466 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC16.98■□□□□ 0.31
NOTCH4Q99466 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
NOTCH4Q99466 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC16.98■□□□□ 0.31
NOTCH4Q99466 AL023806.1-201ENST00000603994 1649 ntBASIC16.98■□□□□ 0.31
NOTCH4Q99466 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
NOTCH4Q99466 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC16.98■□□□□ 0.31
NOTCH4Q99466 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
NOTCH4Q99466 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
NOTCH4Q99466 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
NOTCH4Q99466 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
NOTCH4Q99466 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
NOTCH4Q99466 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
NOTCH4Q99466 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
NOTCH4Q99466 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
NOTCH4Q99466 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
NOTCH4Q99466 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
NOTCH4Q99466 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
NOTCH4Q99466 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
NOTCH4Q99466 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
NOTCH4Q99466 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
NOTCH4Q99466 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
NOTCH4Q99466 AC119751.2-201ENST00000504529 210 ntBASIC16.98■□□□□ 0.31
NOTCH4Q99466 AC023310.3-201ENST00000557027 670 ntBASIC16.98■□□□□ 0.31
NOTCH4Q99466 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC16.98■□□□□ 0.31
NOTCH4Q99466 AC100756.1-201ENST00000562736 682 ntBASIC16.98■□□□□ 0.31
NOTCH4Q99466 AC138749.3-201ENST00000567691 622 ntBASIC16.98■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms