Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC17.32■□□□□ 0.36
CDK5RAP1Q96SZ6 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDK5RAP1Q96SZ6 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDK5RAP1Q96SZ6 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDK5RAP1Q96SZ6 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC17.32■□□□□ 0.36
CDK5RAP1Q96SZ6 AL645728.1-201ENST00000366221 2101 ntBASIC17.32■□□□□ 0.36
CDK5RAP1Q96SZ6 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDK5RAP1Q96SZ6 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
CDK5RAP1Q96SZ6 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CDK5RAP1Q96SZ6 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDK5RAP1Q96SZ6 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDK5RAP1Q96SZ6 GGCT-205ENST00000409436 954 ntTSL 3 BASIC17.32■□□□□ 0.36
CDK5RAP1Q96SZ6 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC17.32■□□□□ 0.36
CDK5RAP1Q96SZ6 TSEN15P1-201ENST00000423257 515 ntBASIC17.32■□□□□ 0.36
CDK5RAP1Q96SZ6 PMS2P2-201ENST00000425039 1128 ntBASIC17.32■□□□□ 0.36
CDK5RAP1Q96SZ6 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC17.32■□□□□ 0.36
CDK5RAP1Q96SZ6 METTL21AP1-201ENST00000438852 635 ntBASIC17.32■□□□□ 0.36
CDK5RAP1Q96SZ6 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC17.32■□□□□ 0.36
CDK5RAP1Q96SZ6 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC17.32■□□□□ 0.36
CDK5RAP1Q96SZ6 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC17.32■□□□□ 0.36
CDK5RAP1Q96SZ6 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC17.32■□□□□ 0.36
CDK5RAP1Q96SZ6 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC17.32■□□□□ 0.36
CDK5RAP1Q96SZ6 AC084121.4-201ENST00000641598 221 ntBASIC17.32■□□□□ 0.36
CDK5RAP1Q96SZ6 AF228730.8-201ENST00000642140 221 ntBASIC17.32■□□□□ 0.36
CDK5RAP1Q96SZ6 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CDK5RAP1Q96SZ6 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
CDK5RAP1Q96SZ6 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDK5RAP1Q96SZ6 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDK5RAP1Q96SZ6 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDK5RAP1Q96SZ6 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CDK5RAP1Q96SZ6 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC17.32■□□□□ 0.36
CDK5RAP1Q96SZ6 SNX33P1-201ENST00000592116 1762 ntBASIC17.32■□□□□ 0.36
CDK5RAP1Q96SZ6 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
CDK5RAP1Q96SZ6 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC17.31■□□□□ 0.36
CDK5RAP1Q96SZ6 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDK5RAP1Q96SZ6 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC17.31■□□□□ 0.36
CDK5RAP1Q96SZ6 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC17.31■□□□□ 0.36
CDK5RAP1Q96SZ6 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CDK5RAP1Q96SZ6 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDK5RAP1Q96SZ6 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDK5RAP1Q96SZ6 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDK5RAP1Q96SZ6 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
CDK5RAP1Q96SZ6 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDK5RAP1Q96SZ6 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC17.31■□□□□ 0.36
CDK5RAP1Q96SZ6 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
CDK5RAP1Q96SZ6 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDK5RAP1Q96SZ6 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDK5RAP1Q96SZ6 DPM2-202ENST00000373110 738 ntTSL 2 BASIC17.31■□□□□ 0.36
CDK5RAP1Q96SZ6 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDK5RAP1Q96SZ6 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC17.31■□□□□ 0.36
CDK5RAP1Q96SZ6 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CDK5RAP1Q96SZ6 KRT18P32-201ENST00000424695 1287 ntBASIC17.31■□□□□ 0.36
CDK5RAP1Q96SZ6 PON3-203ENST00000427422 894 ntTSL 3 BASIC17.31■□□□□ 0.36
CDK5RAP1Q96SZ6 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC17.31■□□□□ 0.36
CDK5RAP1Q96SZ6 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC17.31■□□□□ 0.36
CDK5RAP1Q96SZ6 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC17.31■□□□□ 0.36
CDK5RAP1Q96SZ6 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC17.31■□□□□ 0.36
CDK5RAP1Q96SZ6 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC17.31■□□□□ 0.36
CDK5RAP1Q96SZ6 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC17.31■□□□□ 0.36
CDK5RAP1Q96SZ6 AC020765.3-201ENST00000613051 740 ntBASIC17.31■□□□□ 0.36
CDK5RAP1Q96SZ6 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDK5RAP1Q96SZ6 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC17.31■□□□□ 0.36
CDK5RAP1Q96SZ6 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CDK5RAP1Q96SZ6 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDK5RAP1Q96SZ6 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC17.31■□□□□ 0.36
CDK5RAP1Q96SZ6 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
CDK5RAP1Q96SZ6 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CDK5RAP1Q96SZ6 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CDK5RAP1Q96SZ6 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CDK5RAP1Q96SZ6 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
CDK5RAP1Q96SZ6 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CDK5RAP1Q96SZ6 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDK5RAP1Q96SZ6 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC17.31■□□□□ 0.36
CDK5RAP1Q96SZ6 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CDK5RAP1Q96SZ6 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
CDK5RAP1Q96SZ6 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CDK5RAP1Q96SZ6 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC17.3■□□□□ 0.36
CDK5RAP1Q96SZ6 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDK5RAP1Q96SZ6 AL671710.1-201ENST00000610245 2349 ntBASIC17.3■□□□□ 0.36
CDK5RAP1Q96SZ6 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CDK5RAP1Q96SZ6 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC17.3■□□□□ 0.36
CDK5RAP1Q96SZ6 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDK5RAP1Q96SZ6 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDK5RAP1Q96SZ6 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CDK5RAP1Q96SZ6 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CDK5RAP1Q96SZ6 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDK5RAP1Q96SZ6 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC17.3■□□□□ 0.36
CDK5RAP1Q96SZ6 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC17.3■□□□□ 0.36
CDK5RAP1Q96SZ6 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDK5RAP1Q96SZ6 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC17.3■□□□□ 0.36
CDK5RAP1Q96SZ6 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDK5RAP1Q96SZ6 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CDK5RAP1Q96SZ6 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDK5RAP1Q96SZ6 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDK5RAP1Q96SZ6 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC17.3■□□□□ 0.36
CDK5RAP1Q96SZ6 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
CDK5RAP1Q96SZ6 PTMS-202ENST00000389462 773 ntTSL 2 BASIC17.3■□□□□ 0.36
CDK5RAP1Q96SZ6 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CDK5RAP1Q96SZ6 AC069335.1-201ENST00000489972 472 ntBASIC17.3■□□□□ 0.36
CDK5RAP1Q96SZ6 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 57.4 ms