Protein–RNA interactions for Protein: Q96RK4

BBS4, Bardet-Biedl syndrome 4 protein, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4Q96RK4 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
BBS4Q96RK4 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
BBS4Q96RK4 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC15.9■□□□□ 0.14
BBS4Q96RK4 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
BBS4Q96RK4 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
BBS4Q96RK4 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
BBS4Q96RK4 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
BBS4Q96RK4 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
BBS4Q96RK4 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
BBS4Q96RK4 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC15.9■□□□□ 0.14
BBS4Q96RK4 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC15.9■□□□□ 0.14
BBS4Q96RK4 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
BBS4Q96RK4 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
BBS4Q96RK4 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC15.9■□□□□ 0.14
BBS4Q96RK4 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
BBS4Q96RK4 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
BBS4Q96RK4 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC15.9■□□□□ 0.14
BBS4Q96RK4 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC15.9■□□□□ 0.14
BBS4Q96RK4 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC15.9■□□□□ 0.14
BBS4Q96RK4 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC15.9■□□□□ 0.14
BBS4Q96RK4 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC15.9■□□□□ 0.14
BBS4Q96RK4 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
BBS4Q96RK4 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC15.9■□□□□ 0.14
BBS4Q96RK4 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC15.9■□□□□ 0.14
BBS4Q96RK4 HNRNPDP1-201ENST00000439535 754 ntBASIC15.9■□□□□ 0.14
BBS4Q96RK4 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC15.9■□□□□ 0.14
BBS4Q96RK4 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC15.9■□□□□ 0.14
BBS4Q96RK4 RPS29-206ENST00000557111 488 ntTSL 2 BASIC15.9■□□□□ 0.14
BBS4Q96RK4 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC15.9■□□□□ 0.14
BBS4Q96RK4 CALM3-211ENST00000598871 561 ntTSL 4 BASIC15.9■□□□□ 0.14
BBS4Q96RK4 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC15.9■□□□□ 0.14
BBS4Q96RK4 AL031008.1-201ENST00000619963 541 ntBASIC15.9■□□□□ 0.14
BBS4Q96RK4 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC15.9■□□□□ 0.14
BBS4Q96RK4 VPS51-217ENST00000639871 243 ntTSL 5 BASIC15.9■□□□□ 0.14
BBS4Q96RK4 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
BBS4Q96RK4 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
BBS4Q96RK4 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
BBS4Q96RK4 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
BBS4Q96RK4 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC15.9■□□□□ 0.14
BBS4Q96RK4 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC15.9■□□□□ 0.14
BBS4Q96RK4 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
BBS4Q96RK4 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
BBS4Q96RK4 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC15.9■□□□□ 0.14
BBS4Q96RK4 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
BBS4Q96RK4 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.14
BBS4Q96RK4 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
BBS4Q96RK4 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
BBS4Q96RK4 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC15.89■□□□□ 0.13
BBS4Q96RK4 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
BBS4Q96RK4 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
BBS4Q96RK4 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
BBS4Q96RK4 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC15.89■□□□□ 0.13
BBS4Q96RK4 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
BBS4Q96RK4 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC15.89■□□□□ 0.13
BBS4Q96RK4 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
BBS4Q96RK4 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC15.89■□□□□ 0.13
BBS4Q96RK4 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC15.89■□□□□ 0.13
BBS4Q96RK4 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
BBS4Q96RK4 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
BBS4Q96RK4 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.13
BBS4Q96RK4 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
BBS4Q96RK4 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC15.89■□□□□ 0.13
BBS4Q96RK4 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC15.89■□□□□ 0.13
BBS4Q96RK4 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
BBS4Q96RK4 SLC25A6P2-201ENST00000497974 877 ntBASIC15.89■□□□□ 0.13
BBS4Q96RK4 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC15.89■□□□□ 0.13
BBS4Q96RK4 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
BBS4Q96RK4 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC15.89■□□□□ 0.13
BBS4Q96RK4 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC15.89■□□□□ 0.13
BBS4Q96RK4 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
BBS4Q96RK4 AC013467.2-201ENST00000605472 835 ntBASIC15.89■□□□□ 0.13
BBS4Q96RK4 AC008667.4-201ENST00000607370 168 ntBASIC15.89■□□□□ 0.13
BBS4Q96RK4 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
BBS4Q96RK4 AC148477.8-201ENST00000624298 468 ntBASIC15.89■□□□□ 0.13
BBS4Q96RK4 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
BBS4Q96RK4 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
BBS4Q96RK4 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC15.89■□□□□ 0.13
BBS4Q96RK4 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC15.89■□□□□ 0.13
BBS4Q96RK4 AP002414.3-201ENST00000589352 1468 ntBASIC15.89■□□□□ 0.13
BBS4Q96RK4 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
BBS4Q96RK4 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
BBS4Q96RK4 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
BBS4Q96RK4 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
BBS4Q96RK4 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
BBS4Q96RK4 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
BBS4Q96RK4 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
BBS4Q96RK4 AMT-206ENST00000458307 1860 ntTSL 2 BASIC15.88■□□□□ 0.13
BBS4Q96RK4 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
BBS4Q96RK4 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
BBS4Q96RK4 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
BBS4Q96RK4 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
BBS4Q96RK4 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
BBS4Q96RK4 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC15.88■□□□□ 0.13
BBS4Q96RK4 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
BBS4Q96RK4 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
BBS4Q96RK4 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
BBS4Q96RK4 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC15.88■□□□□ 0.13
BBS4Q96RK4 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC15.88■□□□□ 0.13
BBS4Q96RK4 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
BBS4Q96RK4 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC15.88■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms