Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 AC034105.1-201ENST00000563488 319 ntBASIC19.8■□□□□ 0.76
NEK1Q96PY6 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC19.8■□□□□ 0.76
NEK1Q96PY6 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC19.8■□□□□ 0.76
NEK1Q96PY6 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
NEK1Q96PY6 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC19.8■□□□□ 0.76
NEK1Q96PY6 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC19.8■□□□□ 0.76
NEK1Q96PY6 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC19.8■□□□□ 0.76
NEK1Q96PY6 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NEK1Q96PY6 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NEK1Q96PY6 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
NEK1Q96PY6 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
NEK1Q96PY6 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC19.8■□□□□ 0.76
NEK1Q96PY6 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
NEK1Q96PY6 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
NEK1Q96PY6 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NEK1Q96PY6 IL9RP2-201ENST00000423948 1312 ntBASIC19.79■□□□□ 0.76
NEK1Q96PY6 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC19.79■□□□□ 0.76
NEK1Q96PY6 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
NEK1Q96PY6 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC19.79■□□□□ 0.76
NEK1Q96PY6 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
NEK1Q96PY6 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NEK1Q96PY6 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NEK1Q96PY6 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
NEK1Q96PY6 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
NEK1Q96PY6 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC19.79■□□□□ 0.76
NEK1Q96PY6 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC19.79■□□□□ 0.76
NEK1Q96PY6 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NEK1Q96PY6 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC19.79■□□□□ 0.76
NEK1Q96PY6 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NEK1Q96PY6 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
NEK1Q96PY6 AL513480.1-201ENST00000451731 511 ntBASIC19.79■□□□□ 0.76
NEK1Q96PY6 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NEK1Q96PY6 RPL18-209ENST00000550645 463 ntTSL 5 BASIC19.79■□□□□ 0.76
NEK1Q96PY6 RPL18-214ENST00000552588 559 ntTSL 3 BASIC19.79■□□□□ 0.76
NEK1Q96PY6 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NEK1Q96PY6 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NEK1Q96PY6 AC092364.2-201ENST00000596710 2692 ntBASIC19.79■□□□□ 0.76
NEK1Q96PY6 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
NEK1Q96PY6 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NEK1Q96PY6 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NEK1Q96PY6 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
NEK1Q96PY6 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
NEK1Q96PY6 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NEK1Q96PY6 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
NEK1Q96PY6 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
NEK1Q96PY6 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC19.79■□□□□ 0.76
NEK1Q96PY6 PCDH8P1-201ENST00000428983 2773 ntBASIC19.78■□□□□ 0.76
NEK1Q96PY6 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC19.78■□□□□ 0.76
NEK1Q96PY6 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC19.78■□□□□ 0.76
NEK1Q96PY6 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NEK1Q96PY6 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NEK1Q96PY6 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
NEK1Q96PY6 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
NEK1Q96PY6 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
NEK1Q96PY6 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC19.78■□□□□ 0.76
NEK1Q96PY6 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
NEK1Q96PY6 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
NEK1Q96PY6 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC19.78■□□□□ 0.76
NEK1Q96PY6 HMGA1P7-201ENST00000406908 502 ntBASIC19.78■□□□□ 0.76
NEK1Q96PY6 RHOQP3-201ENST00000437982 621 ntBASIC19.78■□□□□ 0.76
NEK1Q96PY6 RPL13AP23-201ENST00000480739 586 ntBASIC19.78■□□□□ 0.76
NEK1Q96PY6 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC19.78■□□□□ 0.76
NEK1Q96PY6 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC19.78■□□□□ 0.76
NEK1Q96PY6 AC096734.2-201ENST00000562054 433 ntBASIC19.78■□□□□ 0.76
NEK1Q96PY6 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC19.78■□□□□ 0.76
NEK1Q96PY6 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC19.78■□□□□ 0.76
NEK1Q96PY6 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
NEK1Q96PY6 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NEK1Q96PY6 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
NEK1Q96PY6 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
NEK1Q96PY6 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
NEK1Q96PY6 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NEK1Q96PY6 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NEK1Q96PY6 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
NEK1Q96PY6 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC19.78■□□□□ 0.76
NEK1Q96PY6 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
NEK1Q96PY6 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
NEK1Q96PY6 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
NEK1Q96PY6 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC19.77■□□□□ 0.76
NEK1Q96PY6 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
NEK1Q96PY6 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
NEK1Q96PY6 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC19.77■□□□□ 0.76
NEK1Q96PY6 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC19.77■□□□□ 0.76
NEK1Q96PY6 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
NEK1Q96PY6 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
NEK1Q96PY6 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
NEK1Q96PY6 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
NEK1Q96PY6 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC19.77■□□□□ 0.76
NEK1Q96PY6 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
NEK1Q96PY6 STARD13-205ENST00000439831 945 ntTSL 2 BASIC19.77■□□□□ 0.76
NEK1Q96PY6 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC19.77■□□□□ 0.76
NEK1Q96PY6 AC010507.1-201ENST00000633895 436 ntBASIC19.77■□□□□ 0.76
NEK1Q96PY6 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
NEK1Q96PY6 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
NEK1Q96PY6 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC19.77■□□□□ 0.76
NEK1Q96PY6 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
NEK1Q96PY6 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC19.77■□□□□ 0.76
NEK1Q96PY6 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC19.77■□□□□ 0.76
NEK1Q96PY6 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
NEK1Q96PY6 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms