Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
AP1S3Q96PC3 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
AP1S3Q96PC3 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
AP1S3Q96PC3 PRORSD1P-201ENST00000295112 541 ntBASIC12.73□□□□□ -0.37
AP1S3Q96PC3 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
AP1S3Q96PC3 MIR718-201ENST00000390190 70 ntBASIC12.73□□□□□ -0.37
AP1S3Q96PC3 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC12.73□□□□□ -0.37
AP1S3Q96PC3 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
AP1S3Q96PC3 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC12.73□□□□□ -0.37
AP1S3Q96PC3 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC12.73□□□□□ -0.37
AP1S3Q96PC3 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC12.73□□□□□ -0.37
AP1S3Q96PC3 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC12.73□□□□□ -0.37
AP1S3Q96PC3 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC12.73□□□□□ -0.37
AP1S3Q96PC3 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC12.73□□□□□ -0.37
AP1S3Q96PC3 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC12.73□□□□□ -0.37
AP1S3Q96PC3 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC12.73□□□□□ -0.37
AP1S3Q96PC3 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC12.73□□□□□ -0.37
AP1S3Q96PC3 NT5C-210ENST00000582160 860 ntTSL 2 BASIC12.73□□□□□ -0.37
AP1S3Q96PC3 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
AP1S3Q96PC3 AL139327.4-201ENST00000612362 153 ntBASIC12.73□□□□□ -0.37
AP1S3Q96PC3 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC12.73□□□□□ -0.37
AP1S3Q96PC3 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
AP1S3Q96PC3 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
AP1S3Q96PC3 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
AP1S3Q96PC3 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC12.73□□□□□ -0.37
AP1S3Q96PC3 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
AP1S3Q96PC3 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
AP1S3Q96PC3 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
AP1S3Q96PC3 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
AP1S3Q96PC3 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
AP1S3Q96PC3 REXO1L1P-201ENST00000379010 6598 ntBASIC12.73□□□□□ -0.37
AP1S3Q96PC3 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
AP1S3Q96PC3 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
AP1S3Q96PC3 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC12.73□□□□□ -0.37
AP1S3Q96PC3 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
AP1S3Q96PC3 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
AP1S3Q96PC3 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
AP1S3Q96PC3 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
AP1S3Q96PC3 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
AP1S3Q96PC3 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
AP1S3Q96PC3 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC12.72□□□□□ -0.37
AP1S3Q96PC3 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC12.72□□□□□ -0.37
AP1S3Q96PC3 TXLNA-201ENST00000373609 5012 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
AP1S3Q96PC3 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
AP1S3Q96PC3 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
AP1S3Q96PC3 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
AP1S3Q96PC3 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
AP1S3Q96PC3 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
AP1S3Q96PC3 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
AP1S3Q96PC3 MME-217ENST00000616757 1315 ntTSL 5 BASIC12.72□□□□□ -0.37
AP1S3Q96PC3 COG6-202ENST00000416691 5257 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
AP1S3Q96PC3 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
AP1S3Q96PC3 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
AP1S3Q96PC3 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
AP1S3Q96PC3 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
AP1S3Q96PC3 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
AP1S3Q96PC3 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
AP1S3Q96PC3 CDH11-201ENST00000268603 6857 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
AP1S3Q96PC3 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
AP1S3Q96PC3 HES2-202ENST00000377836 507 ntTSL 2 BASIC12.72□□□□□ -0.37
AP1S3Q96PC3 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
AP1S3Q96PC3 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC12.72□□□□□ -0.37
AP1S3Q96PC3 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC12.72□□□□□ -0.37
AP1S3Q96PC3 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
AP1S3Q96PC3 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC12.72□□□□□ -0.37
AP1S3Q96PC3 DDT-203ENST00000403754 569 ntTSL 3 BASIC12.72□□□□□ -0.37
AP1S3Q96PC3 DDT-206ENST00000430101 573 ntTSL 2 BASIC12.72□□□□□ -0.37
AP1S3Q96PC3 GCSHP5-201ENST00000443090 522 ntBASIC12.72□□□□□ -0.37
AP1S3Q96PC3 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
AP1S3Q96PC3 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC12.72□□□□□ -0.37
AP1S3Q96PC3 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC12.72□□□□□ -0.37
AP1S3Q96PC3 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC12.72□□□□□ -0.37
AP1S3Q96PC3 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC12.72□□□□□ -0.37
AP1S3Q96PC3 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC12.72□□□□□ -0.37
AP1S3Q96PC3 TK1-205ENST00000590862 642 ntTSL 3 BASIC12.72□□□□□ -0.37
AP1S3Q96PC3 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
AP1S3Q96PC3 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC12.72□□□□□ -0.37
AP1S3Q96PC3 TNNI1-202ENST00000361379 5413 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
AP1S3Q96PC3 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
AP1S3Q96PC3 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC12.72□□□□□ -0.37
AP1S3Q96PC3 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
AP1S3Q96PC3 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
AP1S3Q96PC3 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
AP1S3Q96PC3 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC12.72□□□□□ -0.37
AP1S3Q96PC3 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
AP1S3Q96PC3 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC12.72□□□□□ -0.37
AP1S3Q96PC3 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
AP1S3Q96PC3 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
AP1S3Q96PC3 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC12.72□□□□□ -0.37
AP1S3Q96PC3 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
AP1S3Q96PC3 HLCS-207ENST00000612277 6112 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
AP1S3Q96PC3 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
AP1S3Q96PC3 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
AP1S3Q96PC3 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
AP1S3Q96PC3 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
AP1S3Q96PC3 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
AP1S3Q96PC3 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
AP1S3Q96PC3 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC12.71□□□□□ -0.37
AP1S3Q96PC3 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
AP1S3Q96PC3 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC12.71□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms