Protein–RNA interactions for Protein: Q96NT5

SLC46A1, Proton-coupled folate transporter, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A1Q96NT5 AL662799.1-202ENST00000614205 422 ntBASIC15.96■□□□□ 0.15
SLC46A1Q96NT5 AC025048.6-201ENST00000634326 1161 ntBASIC15.96■□□□□ 0.15
SLC46A1Q96NT5 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC15.96■□□□□ 0.15
SLC46A1Q96NT5 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
SLC46A1Q96NT5 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
SLC46A1Q96NT5 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
SLC46A1Q96NT5 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC15.96■□□□□ 0.15
SLC46A1Q96NT5 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
SLC46A1Q96NT5 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SLC46A1Q96NT5 AC108860.2-201ENST00000562760 2183 ntBASIC15.96■□□□□ 0.14
SLC46A1Q96NT5 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.14
SLC46A1Q96NT5 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC15.96■□□□□ 0.14
SLC46A1Q96NT5 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC15.96■□□□□ 0.14
SLC46A1Q96NT5 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC15.95■□□□□ 0.14
SLC46A1Q96NT5 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SLC46A1Q96NT5 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SLC46A1Q96NT5 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SLC46A1Q96NT5 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
SLC46A1Q96NT5 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
SLC46A1Q96NT5 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SLC46A1Q96NT5 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC15.95■□□□□ 0.14
SLC46A1Q96NT5 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
SLC46A1Q96NT5 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SLC46A1Q96NT5 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC15.95■□□□□ 0.14
SLC46A1Q96NT5 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
SLC46A1Q96NT5 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SLC46A1Q96NT5 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC15.95■□□□□ 0.14
SLC46A1Q96NT5 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
SLC46A1Q96NT5 NME2P1-201ENST00000426182 414 ntBASIC15.95■□□□□ 0.14
SLC46A1Q96NT5 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
SLC46A1Q96NT5 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC15.95■□□□□ 0.14
SLC46A1Q96NT5 AC027369.6-201ENST00000525520 931 ntBASIC15.95■□□□□ 0.14
SLC46A1Q96NT5 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
SLC46A1Q96NT5 AL596325.1-201ENST00000563991 1082 ntBASIC15.95■□□□□ 0.14
SLC46A1Q96NT5 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC15.95■□□□□ 0.14
SLC46A1Q96NT5 AL031055.1-201ENST00000606362 631 ntBASIC15.95■□□□□ 0.14
SLC46A1Q96NT5 AL008721.1-201ENST00000609964 604 ntBASIC15.95■□□□□ 0.14
SLC46A1Q96NT5 WT1-AS_2.1-201ENST00000613208 137 ntBASIC15.95■□□□□ 0.14
SLC46A1Q96NT5 AL590560.3-201ENST00000623350 461 ntBASIC15.95■□□□□ 0.14
SLC46A1Q96NT5 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC15.95■□□□□ 0.14
SLC46A1Q96NT5 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
SLC46A1Q96NT5 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
SLC46A1Q96NT5 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
SLC46A1Q96NT5 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
SLC46A1Q96NT5 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SLC46A1Q96NT5 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SLC46A1Q96NT5 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
SLC46A1Q96NT5 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC15.95■□□□□ 0.14
SLC46A1Q96NT5 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
SLC46A1Q96NT5 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SLC46A1Q96NT5 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
SLC46A1Q96NT5 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SLC46A1Q96NT5 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
SLC46A1Q96NT5 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC15.94■□□□□ 0.14
SLC46A1Q96NT5 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
SLC46A1Q96NT5 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC15.94■□□□□ 0.14
SLC46A1Q96NT5 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
SLC46A1Q96NT5 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC15.94■□□□□ 0.14
SLC46A1Q96NT5 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
SLC46A1Q96NT5 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SLC46A1Q96NT5 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
SLC46A1Q96NT5 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SLC46A1Q96NT5 OR8S1-201ENST00000310194 1080 ntBASIC15.94■□□□□ 0.14
SLC46A1Q96NT5 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SLC46A1Q96NT5 MRPS18AP1-201ENST00000414458 589 ntBASIC15.94■□□□□ 0.14
SLC46A1Q96NT5 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC15.94■□□□□ 0.14
SLC46A1Q96NT5 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC15.94■□□□□ 0.14
SLC46A1Q96NT5 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
SLC46A1Q96NT5 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
SLC46A1Q96NT5 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
SLC46A1Q96NT5 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC15.94■□□□□ 0.14
SLC46A1Q96NT5 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC15.94■□□□□ 0.14
SLC46A1Q96NT5 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
SLC46A1Q96NT5 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
SLC46A1Q96NT5 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC15.94■□□□□ 0.14
SLC46A1Q96NT5 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
SLC46A1Q96NT5 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SLC46A1Q96NT5 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC15.94■□□□□ 0.14
SLC46A1Q96NT5 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
SLC46A1Q96NT5 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SLC46A1Q96NT5 EML3-212ENST00000494176 2901 ntTSL 2 BASIC15.94■□□□□ 0.14
SLC46A1Q96NT5 EML3-216ENST00000529309 2909 ntTSL 2 BASIC15.94■□□□□ 0.14
SLC46A1Q96NT5 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
SLC46A1Q96NT5 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SLC46A1Q96NT5 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
SLC46A1Q96NT5 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC15.94■□□□□ 0.14
SLC46A1Q96NT5 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
SLC46A1Q96NT5 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SLC46A1Q96NT5 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC15.94■□□□□ 0.14
SLC46A1Q96NT5 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
SLC46A1Q96NT5 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
SLC46A1Q96NT5 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SLC46A1Q96NT5 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC15.93■□□□□ 0.14
SLC46A1Q96NT5 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
SLC46A1Q96NT5 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
SLC46A1Q96NT5 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SLC46A1Q96NT5 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SLC46A1Q96NT5 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC15.93■□□□□ 0.14
SLC46A1Q96NT5 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC15.93■□□□□ 0.14
SLC46A1Q96NT5 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms