Protein–RNA interactions for Protein: Q96L92

SNX27, Sorting nexin-27, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27Q96L92 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SNX27Q96L92 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC17.99■□□□□ 0.47
SNX27Q96L92 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.47
SNX27Q96L92 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC17.99■□□□□ 0.47
SNX27Q96L92 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
SNX27Q96L92 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC17.99■□□□□ 0.47
SNX27Q96L92 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC17.99■□□□□ 0.47
SNX27Q96L92 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SNX27Q96L92 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC17.99■□□□□ 0.47
SNX27Q96L92 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
SNX27Q96L92 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC17.99■□□□□ 0.47
SNX27Q96L92 KRT18P34-201ENST00000488218 1270 ntBASIC17.99■□□□□ 0.47
SNX27Q96L92 DAD1-205ENST00000543337 501 ntTSL 3 BASIC17.99■□□□□ 0.47
SNX27Q96L92 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC17.99■□□□□ 0.47
SNX27Q96L92 AC027307.2-201ENST00000591252 911 ntBASIC17.99■□□□□ 0.47
SNX27Q96L92 CECR7-204ENST00000609932 568 ntTSL 2 BASIC17.99■□□□□ 0.47
SNX27Q96L92 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC17.99■□□□□ 0.47
SNX27Q96L92 RETN-203ENST00000629642 400 ntTSL 5 BASIC17.99■□□□□ 0.47
SNX27Q96L92 AC084121.4-201ENST00000641598 221 ntBASIC17.99■□□□□ 0.47
SNX27Q96L92 AF228730.8-201ENST00000642140 221 ntBASIC17.99■□□□□ 0.47
SNX27Q96L92 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC17.99■□□□□ 0.47
SNX27Q96L92 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
SNX27Q96L92 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC17.99■□□□□ 0.47
SNX27Q96L92 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC17.99■□□□□ 0.47
SNX27Q96L92 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
SNX27Q96L92 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
SNX27Q96L92 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SNX27Q96L92 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
SNX27Q96L92 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC17.99■□□□□ 0.47
SNX27Q96L92 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC17.99■□□□□ 0.47
SNX27Q96L92 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC17.98■□□□□ 0.47
SNX27Q96L92 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
SNX27Q96L92 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SNX27Q96L92 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SNX27Q96L92 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC17.98■□□□□ 0.47
SNX27Q96L92 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
SNX27Q96L92 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC17.98■□□□□ 0.47
SNX27Q96L92 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SNX27Q96L92 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC17.98■□□□□ 0.47
SNX27Q96L92 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
SNX27Q96L92 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SNX27Q96L92 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SNX27Q96L92 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
SNX27Q96L92 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
SNX27Q96L92 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC17.98■□□□□ 0.47
SNX27Q96L92 GPS2P2-201ENST00000430745 888 ntBASIC17.98■□□□□ 0.47
SNX27Q96L92 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC17.98■□□□□ 0.47
SNX27Q96L92 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC17.98■□□□□ 0.47
SNX27Q96L92 POLD4-211ENST00000539074 714 ntTSL 3 BASIC17.98■□□□□ 0.47
SNX27Q96L92 NOP2-211ENST00000540228 668 ntTSL 2 BASIC17.98■□□□□ 0.47
SNX27Q96L92 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC17.98■□□□□ 0.47
SNX27Q96L92 AL138918.1-201ENST00000568306 659 ntBASIC17.98■□□□□ 0.47
SNX27Q96L92 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC17.98■□□□□ 0.47
SNX27Q96L92 LINC00628-201ENST00000628516 1289 ntBASIC17.98■□□□□ 0.47
SNX27Q96L92 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC17.98■□□□□ 0.47
SNX27Q96L92 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
SNX27Q96L92 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SNX27Q96L92 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SNX27Q96L92 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
SNX27Q96L92 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC17.98■□□□□ 0.47
SNX27Q96L92 AL512652.2-201ENST00000625156 1716 ntBASIC17.98■□□□□ 0.47
SNX27Q96L92 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
SNX27Q96L92 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
SNX27Q96L92 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SNX27Q96L92 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC17.98■□□□□ 0.47
SNX27Q96L92 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SNX27Q96L92 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SNX27Q96L92 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
SNX27Q96L92 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SNX27Q96L92 AL603756.1-201ENST00000606511 2163 ntBASIC17.97■□□□□ 0.47
SNX27Q96L92 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SNX27Q96L92 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
SNX27Q96L92 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC17.97■□□□□ 0.47
SNX27Q96L92 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC17.97■□□□□ 0.47
SNX27Q96L92 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SNX27Q96L92 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC17.97■□□□□ 0.47
SNX27Q96L92 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SNX27Q96L92 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
SNX27Q96L92 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
SNX27Q96L92 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SNX27Q96L92 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC17.97■□□□□ 0.47
SNX27Q96L92 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC17.97■□□□□ 0.47
SNX27Q96L92 AP000842.3-202ENST00000569238 1080 ntBASIC17.97■□□□□ 0.47
SNX27Q96L92 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC17.97■□□□□ 0.47
SNX27Q96L92 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC17.97■□□□□ 0.47
SNX27Q96L92 SSH2-211ENST00000590153 570 ntTSL 4 BASIC17.97■□□□□ 0.47
SNX27Q96L92 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC17.97■□□□□ 0.47
SNX27Q96L92 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC17.97■□□□□ 0.47
SNX27Q96L92 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC17.97■□□□□ 0.47
SNX27Q96L92 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
SNX27Q96L92 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SNX27Q96L92 UXT-AS1-201ENST00000590504 1525 ntBASIC17.97■□□□□ 0.47
SNX27Q96L92 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
SNX27Q96L92 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SNX27Q96L92 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SNX27Q96L92 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
SNX27Q96L92 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
SNX27Q96L92 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC17.97■□□□□ 0.47
SNX27Q96L92 AMT-206ENST00000458307 1860 ntTSL 2 BASIC17.97■□□□□ 0.47
SNX27Q96L92 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms