Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
CHAMP1Q96JM3 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
CHAMP1Q96JM3 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
CHAMP1Q96JM3 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CHAMP1Q96JM3 AC079776.2-201ENST00000641154 1609 ntBASIC19.44■□□□□ 0.7
CHAMP1Q96JM3 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CHAMP1Q96JM3 AP003680.1-201ENST00000598970 3660 ntBASIC19.44■□□□□ 0.7
CHAMP1Q96JM3 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
CHAMP1Q96JM3 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CHAMP1Q96JM3 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CHAMP1Q96JM3 REXO1L8P-201ENST00000604378 1897 ntBASIC19.44■□□□□ 0.7
CHAMP1Q96JM3 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CHAMP1Q96JM3 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CHAMP1Q96JM3 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CHAMP1Q96JM3 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC19.44■□□□□ 0.7
CHAMP1Q96JM3 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CHAMP1Q96JM3 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CHAMP1Q96JM3 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
CHAMP1Q96JM3 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CHAMP1Q96JM3 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CHAMP1Q96JM3 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CHAMP1Q96JM3 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
CHAMP1Q96JM3 PCED1CP-201ENST00000419887 785 ntBASIC19.44■□□□□ 0.7
CHAMP1Q96JM3 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC19.44■□□□□ 0.7
CHAMP1Q96JM3 RBSN-204ENST00000449050 903 ntTSL 2 BASIC19.44■□□□□ 0.7
CHAMP1Q96JM3 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CHAMP1Q96JM3 AP000867.3-201ENST00000524675 377 ntBASIC19.44■□□□□ 0.7
CHAMP1Q96JM3 AP002490.2-201ENST00000524791 560 ntBASIC19.44■□□□□ 0.7
CHAMP1Q96JM3 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC19.44■□□□□ 0.7
CHAMP1Q96JM3 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC19.44■□□□□ 0.7
CHAMP1Q96JM3 Z69720.1-201ENST00000601483 472 ntBASIC19.44■□□□□ 0.7
CHAMP1Q96JM3 TERC-201ENST00000602385 541 ntBASIC19.44■□□□□ 0.7
CHAMP1Q96JM3 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CHAMP1Q96JM3 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC19.44■□□□□ 0.7
CHAMP1Q96JM3 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC19.44■□□□□ 0.7
CHAMP1Q96JM3 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CHAMP1Q96JM3 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC19.44■□□□□ 0.7
CHAMP1Q96JM3 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CHAMP1Q96JM3 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CHAMP1Q96JM3 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC19.44■□□□□ 0.7
CHAMP1Q96JM3 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CHAMP1Q96JM3 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC19.44■□□□□ 0.7
CHAMP1Q96JM3 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
CHAMP1Q96JM3 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC19.44■□□□□ 0.7
CHAMP1Q96JM3 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CHAMP1Q96JM3 AL031731.1-201ENST00000642131 2094 ntBASIC19.44■□□□□ 0.7
CHAMP1Q96JM3 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CHAMP1Q96JM3 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CHAMP1Q96JM3 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
CHAMP1Q96JM3 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC19.43■□□□□ 0.7
CHAMP1Q96JM3 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC19.43■□□□□ 0.7
CHAMP1Q96JM3 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CHAMP1Q96JM3 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC19.43■□□□□ 0.7
CHAMP1Q96JM3 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC19.43■□□□□ 0.7
CHAMP1Q96JM3 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC19.43■□□□□ 0.7
CHAMP1Q96JM3 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC19.43■□□□□ 0.7
CHAMP1Q96JM3 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
CHAMP1Q96JM3 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CHAMP1Q96JM3 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CHAMP1Q96JM3 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CHAMP1Q96JM3 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC19.43■□□□□ 0.7
CHAMP1Q96JM3 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CHAMP1Q96JM3 NUS1P2-201ENST00000417358 873 ntBASIC19.43■□□□□ 0.7
CHAMP1Q96JM3 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
CHAMP1Q96JM3 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
CHAMP1Q96JM3 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC19.43■□□□□ 0.7
CHAMP1Q96JM3 AL353135.1-201ENST00000606729 504 ntBASIC19.43■□□□□ 0.7
CHAMP1Q96JM3 AC006538.3-201ENST00000612495 578 ntBASIC19.43■□□□□ 0.7
CHAMP1Q96JM3 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC19.43■□□□□ 0.7
CHAMP1Q96JM3 AC073592.4-201ENST00000623827 446 ntBASIC19.43■□□□□ 0.7
CHAMP1Q96JM3 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC19.43■□□□□ 0.7
CHAMP1Q96JM3 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CHAMP1Q96JM3 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CHAMP1Q96JM3 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC19.43■□□□□ 0.7
CHAMP1Q96JM3 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CHAMP1Q96JM3 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CHAMP1Q96JM3 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC19.43■□□□□ 0.7
CHAMP1Q96JM3 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC19.43■□□□□ 0.7
CHAMP1Q96JM3 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC19.43■□□□□ 0.7
CHAMP1Q96JM3 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
CHAMP1Q96JM3 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CHAMP1Q96JM3 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC19.42■□□□□ 0.7
CHAMP1Q96JM3 SIGLEC16-201ENST00000599858 1437 ntBASIC19.42■□□□□ 0.7
CHAMP1Q96JM3 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
CHAMP1Q96JM3 AC073347.1-201ENST00000421633 2643 ntBASIC19.42■□□□□ 0.7
CHAMP1Q96JM3 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
CHAMP1Q96JM3 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CHAMP1Q96JM3 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CHAMP1Q96JM3 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CHAMP1Q96JM3 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CHAMP1Q96JM3 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CHAMP1Q96JM3 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC19.42■□□□□ 0.7
CHAMP1Q96JM3 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC19.42■□□□□ 0.7
CHAMP1Q96JM3 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC19.42■□□□□ 0.7
CHAMP1Q96JM3 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CHAMP1Q96JM3 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CHAMP1Q96JM3 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC19.42■□□□□ 0.7
CHAMP1Q96JM3 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC19.42■□□□□ 0.7
CHAMP1Q96JM3 THAP5-204ENST00000438865 868 ntTSL 2 BASIC19.42■□□□□ 0.7
CHAMP1Q96JM3 ABCD1P5-201ENST00000445663 754 ntBASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms