Protein–RNA interactions for Protein: Q96IS3

RAX2, Retina and anterior neural fold homeobox protein 2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAX2Q96IS3 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
RAX2Q96IS3 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC13.09□□□□□ -0.31
RAX2Q96IS3 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
RAX2Q96IS3 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.31
RAX2Q96IS3 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
RAX2Q96IS3 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC13.08□□□□□ -0.32
RAX2Q96IS3 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC13.08□□□□□ -0.32
RAX2Q96IS3 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
RAX2Q96IS3 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
RAX2Q96IS3 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
RAX2Q96IS3 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
RAX2Q96IS3 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
RAX2Q96IS3 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
RAX2Q96IS3 AC016396.2-201ENST00000562575 1417 ntBASIC13.08□□□□□ -0.32
RAX2Q96IS3 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC13.08□□□□□ -0.32
RAX2Q96IS3 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
RAX2Q96IS3 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
RAX2Q96IS3 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
RAX2Q96IS3 DDT-204ENST00000404092 805 ntTSL 3 BASIC13.08□□□□□ -0.32
RAX2Q96IS3 AC254562.1-201ENST00000417586 456 ntBASIC13.08□□□□□ -0.32
RAX2Q96IS3 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC13.08□□□□□ -0.32
RAX2Q96IS3 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
RAX2Q96IS3 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC13.08□□□□□ -0.32
RAX2Q96IS3 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC13.08□□□□□ -0.32
RAX2Q96IS3 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC13.08□□□□□ -0.32
RAX2Q96IS3 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
RAX2Q96IS3 AL031432.2-201ENST00000566714 459 ntBASIC13.08□□□□□ -0.32
RAX2Q96IS3 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC13.08□□□□□ -0.32
RAX2Q96IS3 AL928711.1-201ENST00000570165 459 ntBASIC13.08□□□□□ -0.32
RAX2Q96IS3 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC13.08□□□□□ -0.32
RAX2Q96IS3 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC13.08□□□□□ -0.32
RAX2Q96IS3 TPR-209ENST00000613151 2478 ntTSL 5 BASIC13.08□□□□□ -0.32
RAX2Q96IS3 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
RAX2Q96IS3 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
RAX2Q96IS3 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
RAX2Q96IS3 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
RAX2Q96IS3 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
RAX2Q96IS3 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
RAX2Q96IS3 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
RAX2Q96IS3 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
RAX2Q96IS3 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
RAX2Q96IS3 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC13.08□□□□□ -0.32
RAX2Q96IS3 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC13.08□□□□□ -0.32
RAX2Q96IS3 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
RAX2Q96IS3 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
RAX2Q96IS3 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
RAX2Q96IS3 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
RAX2Q96IS3 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC13.07□□□□□ -0.32
RAX2Q96IS3 EGFEM1P-202ENST00000431685 1563 ntBASIC13.07□□□□□ -0.32
RAX2Q96IS3 AL138688.1-201ENST00000624851 1594 ntBASIC13.07□□□□□ -0.32
RAX2Q96IS3 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
RAX2Q96IS3 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
RAX2Q96IS3 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
RAX2Q96IS3 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
RAX2Q96IS3 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC13.07□□□□□ -0.32
RAX2Q96IS3 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
RAX2Q96IS3 AC092919.2-201ENST00000623631 1645 ntBASIC13.07□□□□□ -0.32
RAX2Q96IS3 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
RAX2Q96IS3 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
RAX2Q96IS3 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
RAX2Q96IS3 GGCT-205ENST00000409436 954 ntTSL 3 BASIC13.07□□□□□ -0.32
RAX2Q96IS3 ACTG1P14-201ENST00000446382 1122 ntBASIC13.07□□□□□ -0.32
RAX2Q96IS3 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC13.07□□□□□ -0.32
RAX2Q96IS3 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
RAX2Q96IS3 PUS1-205ENST00000535067 838 ntTSL 3 BASIC13.07□□□□□ -0.32
RAX2Q96IS3 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC13.07□□□□□ -0.32
RAX2Q96IS3 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC13.07□□□□□ -0.32
RAX2Q96IS3 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC13.07□□□□□ -0.32
RAX2Q96IS3 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC13.07□□□□□ -0.32
RAX2Q96IS3 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC13.07□□□□□ -0.32
RAX2Q96IS3 AC092902.6-201ENST00000641783 218 ntBASIC13.07□□□□□ -0.32
RAX2Q96IS3 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
RAX2Q96IS3 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC13.07□□□□□ -0.32
RAX2Q96IS3 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
RAX2Q96IS3 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
RAX2Q96IS3 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC13.07□□□□□ -0.32
RAX2Q96IS3 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
RAX2Q96IS3 FST-202ENST00000396947 2538 ntTSL 5 BASIC13.07□□□□□ -0.32
RAX2Q96IS3 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
RAX2Q96IS3 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
RAX2Q96IS3 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
RAX2Q96IS3 AC093525.9-201ENST00000624961 1746 ntBASIC13.07□□□□□ -0.32
RAX2Q96IS3 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
RAX2Q96IS3 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC13.07□□□□□ -0.32
RAX2Q96IS3 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
RAX2Q96IS3 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
RAX2Q96IS3 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
RAX2Q96IS3 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
RAX2Q96IS3 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
RAX2Q96IS3 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
RAX2Q96IS3 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC13.06□□□□□ -0.32
RAX2Q96IS3 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
RAX2Q96IS3 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC13.06□□□□□ -0.32
RAX2Q96IS3 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
RAX2Q96IS3 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
RAX2Q96IS3 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
RAX2Q96IS3 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC13.06□□□□□ -0.32
RAX2Q96IS3 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC13.06□□□□□ -0.32
RAX2Q96IS3 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
RAX2Q96IS3 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC13.06□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms