Protein–RNA interactions for Protein: Q969E2

SCAMP4, Secretory carrier-associated membrane protein 4, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4Q969E2 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SCAMP4Q969E2 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SCAMP4Q969E2 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC16.59■□□□□ 0.25
SCAMP4Q969E2 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SCAMP4Q969E2 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SCAMP4Q969E2 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SCAMP4Q969E2 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SCAMP4Q969E2 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC16.59■□□□□ 0.25
SCAMP4Q969E2 AC092171.3-201ENST00000610122 2651 ntBASIC16.59■□□□□ 0.25
SCAMP4Q969E2 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
SCAMP4Q969E2 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SCAMP4Q969E2 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC16.59■□□□□ 0.25
SCAMP4Q969E2 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SCAMP4Q969E2 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC16.59■□□□□ 0.25
SCAMP4Q969E2 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC16.59■□□□□ 0.25
SCAMP4Q969E2 WDR53-204ENST00000433160 887 ntTSL 5 BASIC16.59■□□□□ 0.25
SCAMP4Q969E2 DNAJB3-202ENST00000449667 1266 ntBASIC16.59■□□□□ 0.25
SCAMP4Q969E2 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC16.59■□□□□ 0.25
SCAMP4Q969E2 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC16.59■□□□□ 0.25
SCAMP4Q969E2 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC16.59■□□□□ 0.25
SCAMP4Q969E2 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
SCAMP4Q969E2 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC16.59■□□□□ 0.25
SCAMP4Q969E2 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC16.59■□□□□ 0.25
SCAMP4Q969E2 MIR3909-201ENST00000579518 119 ntBASIC16.59■□□□□ 0.25
SCAMP4Q969E2 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC16.59■□□□□ 0.25
SCAMP4Q969E2 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
SCAMP4Q969E2 AL596442.2-201ENST00000610240 980 ntBASIC16.59■□□□□ 0.25
SCAMP4Q969E2 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
SCAMP4Q969E2 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC16.59■□□□□ 0.25
SCAMP4Q969E2 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SCAMP4Q969E2 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SCAMP4Q969E2 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
SCAMP4Q969E2 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
SCAMP4Q969E2 FLJ38576-201ENST00000623820 2459 ntBASIC16.59■□□□□ 0.25
SCAMP4Q969E2 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
SCAMP4Q969E2 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
SCAMP4Q969E2 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC16.59■□□□□ 0.25
SCAMP4Q969E2 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
SCAMP4Q969E2 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC16.59■□□□□ 0.25
SCAMP4Q969E2 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
SCAMP4Q969E2 AL512652.2-201ENST00000625156 1716 ntBASIC16.59■□□□□ 0.25
SCAMP4Q969E2 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SCAMP4Q969E2 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SCAMP4Q969E2 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SCAMP4Q969E2 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.25
SCAMP4Q969E2 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
SCAMP4Q969E2 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
SCAMP4Q969E2 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.25
SCAMP4Q969E2 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
SCAMP4Q969E2 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
SCAMP4Q969E2 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SCAMP4Q969E2 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SCAMP4Q969E2 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SCAMP4Q969E2 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SCAMP4Q969E2 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SCAMP4Q969E2 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC16.58■□□□□ 0.24
SCAMP4Q969E2 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SCAMP4Q969E2 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SCAMP4Q969E2 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC16.58■□□□□ 0.24
SCAMP4Q969E2 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC16.58■□□□□ 0.24
SCAMP4Q969E2 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SCAMP4Q969E2 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC16.58■□□□□ 0.24
SCAMP4Q969E2 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SCAMP4Q969E2 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SCAMP4Q969E2 AL161645.1-201ENST00000622716 1255 ntBASIC16.58■□□□□ 0.24
SCAMP4Q969E2 AL139011.1-202ENST00000642063 584 ntBASIC16.58■□□□□ 0.24
SCAMP4Q969E2 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SCAMP4Q969E2 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SCAMP4Q969E2 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SCAMP4Q969E2 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC16.58■□□□□ 0.24
SCAMP4Q969E2 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SCAMP4Q969E2 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SCAMP4Q969E2 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC16.58■□□□□ 0.24
SCAMP4Q969E2 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
SCAMP4Q969E2 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC16.58■□□□□ 0.24
SCAMP4Q969E2 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SCAMP4Q969E2 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
SCAMP4Q969E2 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SCAMP4Q969E2 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC16.57■□□□□ 0.24
SCAMP4Q969E2 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SCAMP4Q969E2 AGGF1P2-201ENST00000426656 2106 ntBASIC16.57■□□□□ 0.24
SCAMP4Q969E2 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC16.57■□□□□ 0.24
SCAMP4Q969E2 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC16.57■□□□□ 0.24
SCAMP4Q969E2 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC16.57■□□□□ 0.24
SCAMP4Q969E2 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
SCAMP4Q969E2 AC016027.1-202ENST00000607927 1699 ntBASIC16.57■□□□□ 0.24
SCAMP4Q969E2 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SCAMP4Q969E2 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC16.57■□□□□ 0.24
SCAMP4Q969E2 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
SCAMP4Q969E2 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
SCAMP4Q969E2 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SCAMP4Q969E2 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC16.57■□□□□ 0.24
SCAMP4Q969E2 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC16.57■□□□□ 0.24
SCAMP4Q969E2 AP006288.1-201ENST00000446065 395 ntBASIC16.57■□□□□ 0.24
SCAMP4Q969E2 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
SCAMP4Q969E2 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC16.57■□□□□ 0.24
SCAMP4Q969E2 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
SCAMP4Q969E2 RARRES2P8-201ENST00000566335 367 ntBASIC16.57■□□□□ 0.24
SCAMP4Q969E2 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
SCAMP4Q969E2 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms