Protein–RNA interactions for Protein: Q8NEE8

TTC16, Tetratricopeptide repeat protein 16, humanhuman

Predictions only

Length 873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC16Q8NEE8 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC17.6■□□□□ 0.41
TTC16Q8NEE8 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
TTC16Q8NEE8 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TTC16Q8NEE8 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TTC16Q8NEE8 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TTC16Q8NEE8 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TTC16Q8NEE8 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TTC16Q8NEE8 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC17.6■□□□□ 0.41
TTC16Q8NEE8 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TTC16Q8NEE8 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TTC16Q8NEE8 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
TTC16Q8NEE8 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC17.59■□□□□ 0.41
TTC16Q8NEE8 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TTC16Q8NEE8 CROCCP2-202ENST00000412962 2773 ntBASIC17.59■□□□□ 0.41
TTC16Q8NEE8 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC17.59■□□□□ 0.41
TTC16Q8NEE8 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TTC16Q8NEE8 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TTC16Q8NEE8 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
TTC16Q8NEE8 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC17.59■□□□□ 0.41
TTC16Q8NEE8 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TTC16Q8NEE8 AC012569.1-201ENST00000591191 1524 ntBASIC17.59■□□□□ 0.41
TTC16Q8NEE8 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TTC16Q8NEE8 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
TTC16Q8NEE8 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
TTC16Q8NEE8 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC17.59■□□□□ 0.41
TTC16Q8NEE8 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
TTC16Q8NEE8 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TTC16Q8NEE8 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC17.59■□□□□ 0.41
TTC16Q8NEE8 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC17.59■□□□□ 0.41
TTC16Q8NEE8 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
TTC16Q8NEE8 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC17.59■□□□□ 0.41
TTC16Q8NEE8 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC17.59■□□□□ 0.41
TTC16Q8NEE8 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
TTC16Q8NEE8 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC17.59■□□□□ 0.41
TTC16Q8NEE8 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC17.59■□□□□ 0.41
TTC16Q8NEE8 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC17.59■□□□□ 0.41
TTC16Q8NEE8 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC17.59■□□□□ 0.41
TTC16Q8NEE8 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC17.59■□□□□ 0.41
TTC16Q8NEE8 DAD1-205ENST00000543337 501 ntTSL 3 BASIC17.59■□□□□ 0.41
TTC16Q8NEE8 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC17.59■□□□□ 0.41
TTC16Q8NEE8 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
TTC16Q8NEE8 BSG-214ENST00000614867 960 ntTSL 3 BASIC17.59■□□□□ 0.41
TTC16Q8NEE8 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC17.59■□□□□ 0.41
TTC16Q8NEE8 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TTC16Q8NEE8 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TTC16Q8NEE8 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TTC16Q8NEE8 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TTC16Q8NEE8 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC17.59■□□□□ 0.41
TTC16Q8NEE8 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TTC16Q8NEE8 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC17.59■□□□□ 0.41
TTC16Q8NEE8 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TTC16Q8NEE8 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC17.59■□□□□ 0.41
TTC16Q8NEE8 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
TTC16Q8NEE8 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
TTC16Q8NEE8 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
TTC16Q8NEE8 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC17.58■□□□□ 0.41
TTC16Q8NEE8 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
TTC16Q8NEE8 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
TTC16Q8NEE8 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC17.58■□□□□ 0.41
TTC16Q8NEE8 EGFEM1P-202ENST00000431685 1563 ntBASIC17.58■□□□□ 0.41
TTC16Q8NEE8 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC17.58■□□□□ 0.41
TTC16Q8NEE8 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC17.58■□□□□ 0.41
TTC16Q8NEE8 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
TTC16Q8NEE8 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
TTC16Q8NEE8 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
TTC16Q8NEE8 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TTC16Q8NEE8 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TTC16Q8NEE8 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC17.58■□□□□ 0.4
TTC16Q8NEE8 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC17.58■□□□□ 0.4
TTC16Q8NEE8 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TTC16Q8NEE8 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
TTC16Q8NEE8 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
TTC16Q8NEE8 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
TTC16Q8NEE8 STOM-202ENST00000347359 870 ntTSL 2 BASIC17.58■□□□□ 0.4
TTC16Q8NEE8 AL139400.1-201ENST00000366220 510 ntBASIC17.58■□□□□ 0.4
TTC16Q8NEE8 HNRNPFP1-201ENST00000391730 1133 ntBASIC17.58■□□□□ 0.4
TTC16Q8NEE8 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
TTC16Q8NEE8 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC17.58■□□□□ 0.4
TTC16Q8NEE8 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC17.58■□□□□ 0.4
TTC16Q8NEE8 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC17.58■□□□□ 0.4
TTC16Q8NEE8 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC17.58■□□□□ 0.4
TTC16Q8NEE8 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
TTC16Q8NEE8 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC17.58■□□□□ 0.4
TTC16Q8NEE8 AL513210.1-201ENST00000629608 234 ntBASIC17.58■□□□□ 0.4
TTC16Q8NEE8 AL645728.2-201ENST00000641974 660 ntBASIC17.58■□□□□ 0.4
TTC16Q8NEE8 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TTC16Q8NEE8 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC17.58■□□□□ 0.4
TTC16Q8NEE8 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC17.58■□□□□ 0.4
TTC16Q8NEE8 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
TTC16Q8NEE8 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TTC16Q8NEE8 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TTC16Q8NEE8 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TTC16Q8NEE8 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TTC16Q8NEE8 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC17.58■□□□□ 0.4
TTC16Q8NEE8 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC17.58■□□□□ 0.4
TTC16Q8NEE8 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC17.58■□□□□ 0.4
TTC16Q8NEE8 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TTC16Q8NEE8 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC17.58■□□□□ 0.4
TTC16Q8NEE8 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TTC16Q8NEE8 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 63.3 ms