Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC25.77■■□□□ 1.72
CFAP43Q8NDM7 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC25.77■■□□□ 1.72
CFAP43Q8NDM7 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC25.77■■□□□ 1.72
CFAP43Q8NDM7 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC25.77■■□□□ 1.72
CFAP43Q8NDM7 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
CFAP43Q8NDM7 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
CFAP43Q8NDM7 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC25.77■■□□□ 1.72
CFAP43Q8NDM7 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC25.76■■□□□ 1.71
CFAP43Q8NDM7 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC25.76■■□□□ 1.71
CFAP43Q8NDM7 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC25.76■■□□□ 1.71
CFAP43Q8NDM7 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC25.76■■□□□ 1.71
CFAP43Q8NDM7 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
CFAP43Q8NDM7 AC005915.1-201ENST00000624912 2018 ntBASIC25.76■■□□□ 1.71
CFAP43Q8NDM7 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
CFAP43Q8NDM7 AC078925.2-201ENST00000624013 1973 ntBASIC25.76■■□□□ 1.71
CFAP43Q8NDM7 ANKRD19P-201ENST00000338192 862 ntBASIC25.76■■□□□ 1.71
CFAP43Q8NDM7 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC25.76■■□□□ 1.71
CFAP43Q8NDM7 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
CFAP43Q8NDM7 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC25.76■■□□□ 1.71
CFAP43Q8NDM7 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC25.76■■□□□ 1.71
CFAP43Q8NDM7 AL079307.3-201ENST00000556114 283 ntBASIC25.76■■□□□ 1.71
CFAP43Q8NDM7 AC008735.3-201ENST00000596646 500 ntBASIC25.76■■□□□ 1.71
CFAP43Q8NDM7 AC099568.2-201ENST00000609194 695 ntBASIC25.76■■□□□ 1.71
CFAP43Q8NDM7 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC25.76■■□□□ 1.71
CFAP43Q8NDM7 AC018470.1-201ENST00000624790 3129 ntBASIC25.76■■□□□ 1.71
CFAP43Q8NDM7 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC25.76■■□□□ 1.71
CFAP43Q8NDM7 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC25.76■■□□□ 1.71
CFAP43Q8NDM7 AL603756.1-201ENST00000606511 2163 ntBASIC25.76■■□□□ 1.71
CFAP43Q8NDM7 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC25.76■■□□□ 1.71
CFAP43Q8NDM7 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
CFAP43Q8NDM7 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC25.75■■□□□ 1.71
CFAP43Q8NDM7 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC25.75■■□□□ 1.71
CFAP43Q8NDM7 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
CFAP43Q8NDM7 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC25.75■■□□□ 1.71
CFAP43Q8NDM7 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC25.75■■□□□ 1.71
CFAP43Q8NDM7 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC25.75■■□□□ 1.71
CFAP43Q8NDM7 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
CFAP43Q8NDM7 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
CFAP43Q8NDM7 HIST1H2BPS3-201ENST00000419683 341 ntBASIC25.75■■□□□ 1.71
CFAP43Q8NDM7 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC25.75■■□□□ 1.71
CFAP43Q8NDM7 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
CFAP43Q8NDM7 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC25.75■■□□□ 1.71
CFAP43Q8NDM7 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC25.75■■□□□ 1.71
CFAP43Q8NDM7 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC25.75■■□□□ 1.71
CFAP43Q8NDM7 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC25.75■■□□□ 1.71
CFAP43Q8NDM7 AC092552.1-201ENST00000547243 906 ntBASIC25.75■■□□□ 1.71
CFAP43Q8NDM7 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
CFAP43Q8NDM7 GPAA1P2-202ENST00000606848 1787 ntBASIC25.75■■□□□ 1.71
CFAP43Q8NDM7 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
CFAP43Q8NDM7 HLA-A-202ENST00000376806 1854 ntBASIC25.75■■□□□ 1.71
CFAP43Q8NDM7 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
CFAP43Q8NDM7 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC25.75■■□□□ 1.71
CFAP43Q8NDM7 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC25.74■■□□□ 1.71
CFAP43Q8NDM7 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
CFAP43Q8NDM7 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
CFAP43Q8NDM7 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC25.74■■□□□ 1.71
CFAP43Q8NDM7 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC25.74■■□□□ 1.71
CFAP43Q8NDM7 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC25.74■■□□□ 1.71
CFAP43Q8NDM7 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
CFAP43Q8NDM7 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
CFAP43Q8NDM7 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC25.74■■□□□ 1.71
CFAP43Q8NDM7 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
CFAP43Q8NDM7 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC25.74■■□□□ 1.71
CFAP43Q8NDM7 GOLGA2P9-201ENST00000596977 1937 ntBASIC25.74■■□□□ 1.71
CFAP43Q8NDM7 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
CFAP43Q8NDM7 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC25.74■■□□□ 1.71
CFAP43Q8NDM7 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC25.74■■□□□ 1.71
CFAP43Q8NDM7 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC25.74■■□□□ 1.71
CFAP43Q8NDM7 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC25.74■■□□□ 1.71
CFAP43Q8NDM7 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC25.74■■□□□ 1.71
CFAP43Q8NDM7 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
CFAP43Q8NDM7 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC25.73■■□□□ 1.71
CFAP43Q8NDM7 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC25.73■■□□□ 1.71
CFAP43Q8NDM7 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
CFAP43Q8NDM7 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC25.73■■□□□ 1.71
CFAP43Q8NDM7 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
CFAP43Q8NDM7 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
CFAP43Q8NDM7 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
CFAP43Q8NDM7 AL512652.2-201ENST00000625156 1716 ntBASIC25.73■■□□□ 1.71
CFAP43Q8NDM7 VMO1-203ENST00000416307 712 ntTSL 2 BASIC25.73■■□□□ 1.71
CFAP43Q8NDM7 RPL28-204ENST00000431533 590 ntTSL 2 BASIC25.73■■□□□ 1.71
CFAP43Q8NDM7 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
CFAP43Q8NDM7 RPL28-206ENST00000558752 671 ntTSL 3 BASIC25.73■■□□□ 1.71
CFAP43Q8NDM7 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC25.73■■□□□ 1.71
CFAP43Q8NDM7 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
CFAP43Q8NDM7 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
CFAP43Q8NDM7 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC25.73■■□□□ 1.71
CFAP43Q8NDM7 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC25.73■■□□□ 1.71
CFAP43Q8NDM7 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
CFAP43Q8NDM7 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
CFAP43Q8NDM7 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC25.72■■□□□ 1.71
CFAP43Q8NDM7 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
CFAP43Q8NDM7 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
CFAP43Q8NDM7 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
CFAP43Q8NDM7 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC25.72■■□□□ 1.71
CFAP43Q8NDM7 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
CFAP43Q8NDM7 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
CFAP43Q8NDM7 FAM8A2P-201ENST00000528813 1142 ntBASIC25.72■■□□□ 1.71
CFAP43Q8NDM7 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
CFAP43Q8NDM7 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC25.72■■□□□ 1.71
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms