Protein–RNA interactions for Protein: Q8IWZ5

TRIM42, Tripartite motif-containing protein 42, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42Q8IWZ5 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRIM42Q8IWZ5 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRIM42Q8IWZ5 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC16.78■□□□□ 0.28
TRIM42Q8IWZ5 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
TRIM42Q8IWZ5 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC16.78■□□□□ 0.28
TRIM42Q8IWZ5 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TRIM42Q8IWZ5 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRIM42Q8IWZ5 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC16.78■□□□□ 0.28
TRIM42Q8IWZ5 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRIM42Q8IWZ5 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRIM42Q8IWZ5 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRIM42Q8IWZ5 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRIM42Q8IWZ5 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC16.77■□□□□ 0.28
TRIM42Q8IWZ5 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRIM42Q8IWZ5 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRIM42Q8IWZ5 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
TRIM42Q8IWZ5 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC16.77■□□□□ 0.28
TRIM42Q8IWZ5 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRIM42Q8IWZ5 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC16.77■□□□□ 0.28
TRIM42Q8IWZ5 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC16.77■□□□□ 0.28
TRIM42Q8IWZ5 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC16.77■□□□□ 0.28
TRIM42Q8IWZ5 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRIM42Q8IWZ5 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC16.77■□□□□ 0.28
TRIM42Q8IWZ5 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRIM42Q8IWZ5 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC16.77■□□□□ 0.28
TRIM42Q8IWZ5 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TRIM42Q8IWZ5 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRIM42Q8IWZ5 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TRIM42Q8IWZ5 HBZP1-201ENST00000354915 429 ntBASIC16.77■□□□□ 0.28
TRIM42Q8IWZ5 CD9-202ENST00000382515 1229 ntTSL 5 BASIC16.77■□□□□ 0.28
TRIM42Q8IWZ5 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRIM42Q8IWZ5 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TRIM42Q8IWZ5 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRIM42Q8IWZ5 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
TRIM42Q8IWZ5 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC16.77■□□□□ 0.28
TRIM42Q8IWZ5 FGF14-AS2-201ENST00000606448 1074 ntBASIC16.77■□□□□ 0.28
TRIM42Q8IWZ5 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
TRIM42Q8IWZ5 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC16.77■□□□□ 0.28
TRIM42Q8IWZ5 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TRIM42Q8IWZ5 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRIM42Q8IWZ5 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC16.77■□□□□ 0.28
TRIM42Q8IWZ5 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
TRIM42Q8IWZ5 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRIM42Q8IWZ5 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
TRIM42Q8IWZ5 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC16.77■□□□□ 0.27
TRIM42Q8IWZ5 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.27
TRIM42Q8IWZ5 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC16.77■□□□□ 0.27
TRIM42Q8IWZ5 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
TRIM42Q8IWZ5 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
TRIM42Q8IWZ5 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
TRIM42Q8IWZ5 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
TRIM42Q8IWZ5 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC16.77■□□□□ 0.27
TRIM42Q8IWZ5 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
TRIM42Q8IWZ5 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
TRIM42Q8IWZ5 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC16.77■□□□□ 0.27
TRIM42Q8IWZ5 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
TRIM42Q8IWZ5 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
TRIM42Q8IWZ5 AC002310.6-201ENST00000624451 1377 ntBASIC16.77■□□□□ 0.27
TRIM42Q8IWZ5 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRIM42Q8IWZ5 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC16.76■□□□□ 0.27
TRIM42Q8IWZ5 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC16.76■□□□□ 0.27
TRIM42Q8IWZ5 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TRIM42Q8IWZ5 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRIM42Q8IWZ5 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRIM42Q8IWZ5 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRIM42Q8IWZ5 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TRIM42Q8IWZ5 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
TRIM42Q8IWZ5 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC16.76■□□□□ 0.27
TRIM42Q8IWZ5 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC16.76■□□□□ 0.27
TRIM42Q8IWZ5 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRIM42Q8IWZ5 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
TRIM42Q8IWZ5 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC16.76■□□□□ 0.27
TRIM42Q8IWZ5 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC16.76■□□□□ 0.27
TRIM42Q8IWZ5 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TRIM42Q8IWZ5 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TRIM42Q8IWZ5 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRIM42Q8IWZ5 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRIM42Q8IWZ5 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC16.76■□□□□ 0.27
TRIM42Q8IWZ5 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
TRIM42Q8IWZ5 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRIM42Q8IWZ5 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRIM42Q8IWZ5 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRIM42Q8IWZ5 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC16.76■□□□□ 0.27
TRIM42Q8IWZ5 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC16.76■□□□□ 0.27
TRIM42Q8IWZ5 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC16.76■□□□□ 0.27
TRIM42Q8IWZ5 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRIM42Q8IWZ5 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC16.76■□□□□ 0.27
TRIM42Q8IWZ5 DFFB-212ENST00000625756 649 ntTSL 5 BASIC16.76■□□□□ 0.27
TRIM42Q8IWZ5 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC16.76■□□□□ 0.27
TRIM42Q8IWZ5 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRIM42Q8IWZ5 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC16.76■□□□□ 0.27
TRIM42Q8IWZ5 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRIM42Q8IWZ5 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRIM42Q8IWZ5 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRIM42Q8IWZ5 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRIM42Q8IWZ5 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRIM42Q8IWZ5 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRIM42Q8IWZ5 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRIM42Q8IWZ5 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TRIM42Q8IWZ5 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms