Protein–RNA interactions for Protein: Q86Y07

VRK2, Serine/threonine-protein kinase VRK2, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2Q86Y07 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC15.51■□□□□ 0.07
VRK2Q86Y07 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
VRK2Q86Y07 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
VRK2Q86Y07 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
VRK2Q86Y07 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
VRK2Q86Y07 GCK-209ENST00000616242 2260 ntTSL 5 BASIC15.5■□□□□ 0.07
VRK2Q86Y07 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
VRK2Q86Y07 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
VRK2Q86Y07 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
VRK2Q86Y07 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
VRK2Q86Y07 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
VRK2Q86Y07 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
VRK2Q86Y07 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC15.5■□□□□ 0.07
VRK2Q86Y07 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC15.5■□□□□ 0.07
VRK2Q86Y07 RNPS1P1-201ENST00000507437 918 ntBASIC15.5■□□□□ 0.07
VRK2Q86Y07 TOLLIP-AS1-201ENST00000530897 939 ntBASIC15.5■□□□□ 0.07
VRK2Q86Y07 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC15.5■□□□□ 0.07
VRK2Q86Y07 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC15.5■□□□□ 0.07
VRK2Q86Y07 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC15.5■□□□□ 0.07
VRK2Q86Y07 AL512652.2-201ENST00000625156 1716 ntBASIC15.5■□□□□ 0.07
VRK2Q86Y07 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC15.5■□□□□ 0.07
VRK2Q86Y07 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
VRK2Q86Y07 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC15.5■□□□□ 0.07
VRK2Q86Y07 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC15.5■□□□□ 0.07
VRK2Q86Y07 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC15.5■□□□□ 0.07
VRK2Q86Y07 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
VRK2Q86Y07 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
VRK2Q86Y07 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC15.5■□□□□ 0.07
VRK2Q86Y07 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
VRK2Q86Y07 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
VRK2Q86Y07 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
VRK2Q86Y07 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC15.5■□□□□ 0.07
VRK2Q86Y07 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
VRK2Q86Y07 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC15.5■□□□□ 0.07
VRK2Q86Y07 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC15.5■□□□□ 0.07
VRK2Q86Y07 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
VRK2Q86Y07 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
VRK2Q86Y07 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
VRK2Q86Y07 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC15.5■□□□□ 0.07
VRK2Q86Y07 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC15.49■□□□□ 0.07
VRK2Q86Y07 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
VRK2Q86Y07 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
VRK2Q86Y07 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
VRK2Q86Y07 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
VRK2Q86Y07 AC131009.4-201ENST00000624048 1740 ntBASIC15.49■□□□□ 0.07
VRK2Q86Y07 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
VRK2Q86Y07 BANP-204ENST00000393208 2283 ntTSL 2 BASIC15.49■□□□□ 0.07
VRK2Q86Y07 SLC22A20-204ENST00000530038 1673 ntBASIC15.49■□□□□ 0.07
VRK2Q86Y07 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
VRK2Q86Y07 PC-214ENST00000628663 1470 ntTSL 5 BASIC15.49■□□□□ 0.07
VRK2Q86Y07 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
VRK2Q86Y07 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC15.49■□□□□ 0.07
VRK2Q86Y07 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC15.49■□□□□ 0.07
VRK2Q86Y07 PMS2P1-201ENST00000431037 1228 ntBASIC15.49■□□□□ 0.07
VRK2Q86Y07 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC15.49■□□□□ 0.07
VRK2Q86Y07 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC15.49■□□□□ 0.07
VRK2Q86Y07 AC107918.2-201ENST00000530817 355 ntBASIC15.49■□□□□ 0.07
VRK2Q86Y07 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC15.49■□□□□ 0.07
VRK2Q86Y07 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC15.49■□□□□ 0.07
VRK2Q86Y07 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC15.49■□□□□ 0.07
VRK2Q86Y07 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC15.49■□□□□ 0.07
VRK2Q86Y07 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
VRK2Q86Y07 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC15.49■□□□□ 0.07
VRK2Q86Y07 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
VRK2Q86Y07 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
VRK2Q86Y07 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
VRK2Q86Y07 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
VRK2Q86Y07 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC15.49■□□□□ 0.07
VRK2Q86Y07 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
VRK2Q86Y07 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC15.49■□□□□ 0.07
VRK2Q86Y07 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
VRK2Q86Y07 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC15.49■□□□□ 0.07
VRK2Q86Y07 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC15.49■□□□□ 0.07
VRK2Q86Y07 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
VRK2Q86Y07 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
VRK2Q86Y07 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC15.49■□□□□ 0.07
VRK2Q86Y07 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
VRK2Q86Y07 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
VRK2Q86Y07 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC15.48■□□□□ 0.07
VRK2Q86Y07 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC15.48■□□□□ 0.07
VRK2Q86Y07 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
VRK2Q86Y07 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC15.48■□□□□ 0.07
VRK2Q86Y07 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
VRK2Q86Y07 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
VRK2Q86Y07 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
VRK2Q86Y07 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
VRK2Q86Y07 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
VRK2Q86Y07 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC15.48■□□□□ 0.07
VRK2Q86Y07 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
VRK2Q86Y07 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC15.48■□□□□ 0.07
VRK2Q86Y07 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
VRK2Q86Y07 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC15.48■□□□□ 0.07
VRK2Q86Y07 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC15.48■□□□□ 0.07
VRK2Q86Y07 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC15.48■□□□□ 0.07
VRK2Q86Y07 HNRNPDP1-201ENST00000439535 754 ntBASIC15.48■□□□□ 0.07
VRK2Q86Y07 FAM197Y8-203ENST00000450145 560 ntBASIC15.48■□□□□ 0.07
VRK2Q86Y07 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
VRK2Q86Y07 AC136632.2-201ENST00000512891 861 ntBASIC15.48■□□□□ 0.07
VRK2Q86Y07 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC15.48■□□□□ 0.07
VRK2Q86Y07 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC15.48■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms