Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 SPDYE8P-202ENST00000612377 668 ntBASIC16.4■□□□□ 0.22
LRRTM4Q86VH4 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
LRRTM4Q86VH4 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC16.4■□□□□ 0.22
LRRTM4Q86VH4 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
LRRTM4Q86VH4 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LRRTM4Q86VH4 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LRRTM4Q86VH4 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
LRRTM4Q86VH4 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
LRRTM4Q86VH4 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC16.4■□□□□ 0.22
LRRTM4Q86VH4 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
LRRTM4Q86VH4 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LRRTM4Q86VH4 AKAP8P1-201ENST00000434743 1349 ntBASIC16.4■□□□□ 0.22
LRRTM4Q86VH4 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.22
LRRTM4Q86VH4 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC16.39■□□□□ 0.22
LRRTM4Q86VH4 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
LRRTM4Q86VH4 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.22
LRRTM4Q86VH4 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.22
LRRTM4Q86VH4 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.39■□□□□ 0.21
LRRTM4Q86VH4 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
LRRTM4Q86VH4 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
LRRTM4Q86VH4 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LRRTM4Q86VH4 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LRRTM4Q86VH4 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
LRRTM4Q86VH4 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LRRTM4Q86VH4 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LRRTM4Q86VH4 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
LRRTM4Q86VH4 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LRRTM4Q86VH4 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
LRRTM4Q86VH4 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
LRRTM4Q86VH4 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LRRTM4Q86VH4 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LRRTM4Q86VH4 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LRRTM4Q86VH4 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC16.39■□□□□ 0.21
LRRTM4Q86VH4 TIMM8BP1-201ENST00000452384 211 ntBASIC16.39■□□□□ 0.21
LRRTM4Q86VH4 AP000344.2-201ENST00000512987 629 ntBASIC16.39■□□□□ 0.21
LRRTM4Q86VH4 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC16.39■□□□□ 0.21
LRRTM4Q86VH4 AL135744.1-201ENST00000565098 629 ntBASIC16.39■□□□□ 0.21
LRRTM4Q86VH4 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC16.39■□□□□ 0.21
LRRTM4Q86VH4 AL596442.2-201ENST00000610240 980 ntBASIC16.39■□□□□ 0.21
LRRTM4Q86VH4 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
LRRTM4Q86VH4 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
LRRTM4Q86VH4 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
LRRTM4Q86VH4 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
LRRTM4Q86VH4 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
LRRTM4Q86VH4 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LRRTM4Q86VH4 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC16.39■□□□□ 0.21
LRRTM4Q86VH4 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
LRRTM4Q86VH4 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC16.39■□□□□ 0.21
LRRTM4Q86VH4 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
LRRTM4Q86VH4 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LRRTM4Q86VH4 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
LRRTM4Q86VH4 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC16.38■□□□□ 0.21
LRRTM4Q86VH4 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC16.38■□□□□ 0.21
LRRTM4Q86VH4 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
LRRTM4Q86VH4 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC16.38■□□□□ 0.21
LRRTM4Q86VH4 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
LRRTM4Q86VH4 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
LRRTM4Q86VH4 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC16.38■□□□□ 0.21
LRRTM4Q86VH4 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
LRRTM4Q86VH4 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LRRTM4Q86VH4 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
LRRTM4Q86VH4 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC16.38■□□□□ 0.21
LRRTM4Q86VH4 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LRRTM4Q86VH4 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
LRRTM4Q86VH4 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
LRRTM4Q86VH4 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC16.38■□□□□ 0.21
LRRTM4Q86VH4 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC16.38■□□□□ 0.21
LRRTM4Q86VH4 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC16.38■□□□□ 0.21
LRRTM4Q86VH4 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
LRRTM4Q86VH4 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
LRRTM4Q86VH4 AP001160.2-201ENST00000596071 487 ntBASIC16.38■□□□□ 0.21
LRRTM4Q86VH4 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC16.38■□□□□ 0.21
LRRTM4Q86VH4 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC16.38■□□□□ 0.21
LRRTM4Q86VH4 AC105339.1-204ENST00000636249 355 ntBASIC16.38■□□□□ 0.21
LRRTM4Q86VH4 AC099398.1-201ENST00000567919 2776 ntBASIC16.38■□□□□ 0.21
LRRTM4Q86VH4 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
LRRTM4Q86VH4 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LRRTM4Q86VH4 AL603756.1-201ENST00000606511 2163 ntBASIC16.38■□□□□ 0.21
LRRTM4Q86VH4 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC16.38■□□□□ 0.21
LRRTM4Q86VH4 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC16.38■□□□□ 0.21
LRRTM4Q86VH4 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
LRRTM4Q86VH4 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
LRRTM4Q86VH4 AC080080.1-201ENST00000625121 2420 ntBASIC16.38■□□□□ 0.21
LRRTM4Q86VH4 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LRRTM4Q86VH4 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
LRRTM4Q86VH4 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC16.38■□□□□ 0.21
LRRTM4Q86VH4 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
LRRTM4Q86VH4 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LRRTM4Q86VH4 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
LRRTM4Q86VH4 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
LRRTM4Q86VH4 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
LRRTM4Q86VH4 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
LRRTM4Q86VH4 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC16.37■□□□□ 0.21
LRRTM4Q86VH4 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
LRRTM4Q86VH4 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
LRRTM4Q86VH4 AC016027.1-202ENST00000607927 1699 ntBASIC16.37■□□□□ 0.21
LRRTM4Q86VH4 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
LRRTM4Q86VH4 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC16.37■□□□□ 0.21
LRRTM4Q86VH4 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LRRTM4Q86VH4 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 68.8 ms