Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
VPS13BQ7Z7G8 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
VPS13BQ7Z7G8 HLA-DPB2-205ENST00000435074 1188 ntBASIC10.17□□□□□ -0.78
VPS13BQ7Z7G8 TMEM261P1-201ENST00000604899 340 ntBASIC10.17□□□□□ -0.78
VPS13BQ7Z7G8 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC10.17□□□□□ -0.78
VPS13BQ7Z7G8 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
VPS13BQ7Z7G8 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC10.17□□□□□ -0.78
VPS13BQ7Z7G8 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
VPS13BQ7Z7G8 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
VPS13BQ7Z7G8 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
VPS13BQ7Z7G8 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
VPS13BQ7Z7G8 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC10.17□□□□□ -0.78
VPS13BQ7Z7G8 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC10.17□□□□□ -0.78
VPS13BQ7Z7G8 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
VPS13BQ7Z7G8 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
VPS13BQ7Z7G8 AC020907.1-201ENST00000616460 1350 ntBASIC10.17□□□□□ -0.78
VPS13BQ7Z7G8 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC10.17□□□□□ -0.78
VPS13BQ7Z7G8 CSF2RBP1-201ENST00000447905 391 ntBASIC10.17□□□□□ -0.78
VPS13BQ7Z7G8 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC10.17□□□□□ -0.78
VPS13BQ7Z7G8 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC10.17□□□□□ -0.78
VPS13BQ7Z7G8 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC10.17□□□□□ -0.78
VPS13BQ7Z7G8 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC10.17□□□□□ -0.78
VPS13BQ7Z7G8 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
VPS13BQ7Z7G8 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC10.17□□□□□ -0.78
VPS13BQ7Z7G8 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
VPS13BQ7Z7G8 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
VPS13BQ7Z7G8 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
VPS13BQ7Z7G8 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
VPS13BQ7Z7G8 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
VPS13BQ7Z7G8 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC10.17□□□□□ -0.78
VPS13BQ7Z7G8 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC10.17□□□□□ -0.78
VPS13BQ7Z7G8 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
VPS13BQ7Z7G8 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC10.17□□□□□ -0.78
VPS13BQ7Z7G8 MTND6P24-201ENST00000440466 518 ntBASIC10.17□□□□□ -0.78
VPS13BQ7Z7G8 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC10.17□□□□□ -0.78
VPS13BQ7Z7G8 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC10.17□□□□□ -0.78
VPS13BQ7Z7G8 AC133552.6-201ENST00000613406 534 ntBASIC10.17□□□□□ -0.78
VPS13BQ7Z7G8 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
VPS13BQ7Z7G8 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
VPS13BQ7Z7G8 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
VPS13BQ7Z7G8 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
VPS13BQ7Z7G8 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
VPS13BQ7Z7G8 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
VPS13BQ7Z7G8 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC10.17□□□□□ -0.78
VPS13BQ7Z7G8 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
VPS13BQ7Z7G8 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
VPS13BQ7Z7G8 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
VPS13BQ7Z7G8 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC10.17□□□□□ -0.78
VPS13BQ7Z7G8 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
VPS13BQ7Z7G8 NME6-203ENST00000415644 849 ntTSL 2 BASIC10.17□□□□□ -0.78
VPS13BQ7Z7G8 STARD13-205ENST00000439831 945 ntTSL 2 BASIC10.17□□□□□ -0.78
VPS13BQ7Z7G8 AC023310.3-201ENST00000557027 670 ntBASIC10.17□□□□□ -0.78
VPS13BQ7Z7G8 AC100756.1-201ENST00000562736 682 ntBASIC10.17□□□□□ -0.78
VPS13BQ7Z7G8 AC138749.3-201ENST00000567691 622 ntBASIC10.17□□□□□ -0.78
VPS13BQ7Z7G8 AC243960.2-201ENST00000600996 747 ntBASIC10.17□□□□□ -0.78
VPS13BQ7Z7G8 AC116165.1-201ENST00000611806 668 ntBASIC10.17□□□□□ -0.78
VPS13BQ7Z7G8 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC10.17□□□□□ -0.78
VPS13BQ7Z7G8 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC10.17□□□□□ -0.78
VPS13BQ7Z7G8 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
VPS13BQ7Z7G8 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC10.16□□□□□ -0.78
VPS13BQ7Z7G8 AC006277.1-201ENST00000624348 1610 ntBASIC10.16□□□□□ -0.78
VPS13BQ7Z7G8 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
VPS13BQ7Z7G8 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC10.16□□□□□ -0.78
VPS13BQ7Z7G8 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC10.16□□□□□ -0.78
VPS13BQ7Z7G8 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
VPS13BQ7Z7G8 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
VPS13BQ7Z7G8 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC10.16□□□□□ -0.78
VPS13BQ7Z7G8 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC10.16□□□□□ -0.78
VPS13BQ7Z7G8 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
VPS13BQ7Z7G8 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC10.16□□□□□ -0.78
VPS13BQ7Z7G8 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC10.16□□□□□ -0.78
VPS13BQ7Z7G8 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
VPS13BQ7Z7G8 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC10.16□□□□□ -0.78
VPS13BQ7Z7G8 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
VPS13BQ7Z7G8 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
VPS13BQ7Z7G8 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
VPS13BQ7Z7G8 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC10.16□□□□□ -0.78
VPS13BQ7Z7G8 TEX48-202ENST00000612244 662 ntTSL 3 BASIC10.16□□□□□ -0.78
VPS13BQ7Z7G8 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC10.16□□□□□ -0.78
VPS13BQ7Z7G8 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC10.16□□□□□ -0.78
VPS13BQ7Z7G8 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
VPS13BQ7Z7G8 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC10.16□□□□□ -0.78
VPS13BQ7Z7G8 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
VPS13BQ7Z7G8 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
VPS13BQ7Z7G8 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC10.16□□□□□ -0.78
VPS13BQ7Z7G8 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC10.16□□□□□ -0.78
VPS13BQ7Z7G8 PC-204ENST00000524491 1714 ntTSL 2 BASIC10.16□□□□□ -0.78
VPS13BQ7Z7G8 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC10.16□□□□□ -0.78
VPS13BQ7Z7G8 AC093525.8-201ENST00000624099 1342 ntBASIC10.16□□□□□ -0.78
VPS13BQ7Z7G8 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC10.16□□□□□ -0.78
VPS13BQ7Z7G8 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
VPS13BQ7Z7G8 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC10.16□□□□□ -0.78
VPS13BQ7Z7G8 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
VPS13BQ7Z7G8 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC10.16□□□□□ -0.78
VPS13BQ7Z7G8 AC007389.4-201ENST00000454674 793 ntBASIC10.16□□□□□ -0.78
VPS13BQ7Z7G8 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
VPS13BQ7Z7G8 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC10.16□□□□□ -0.78
VPS13BQ7Z7G8 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC10.16□□□□□ -0.78
VPS13BQ7Z7G8 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC10.16□□□□□ -0.78
VPS13BQ7Z7G8 AC092337.1-201ENST00000568699 1129 ntBASIC10.16□□□□□ -0.78
Retrieved 100 of 98,524 protein–RNA pairs in 58.9 ms