Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC15.82■□□□□ 0.12
LPCAT4Q643R3 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LPCAT4Q643R3 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC15.82■□□□□ 0.12
LPCAT4Q643R3 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LPCAT4Q643R3 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC15.82■□□□□ 0.12
LPCAT4Q643R3 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
LPCAT4Q643R3 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LPCAT4Q643R3 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC15.82■□□□□ 0.12
LPCAT4Q643R3 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
LPCAT4Q643R3 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC15.82■□□□□ 0.12
LPCAT4Q643R3 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC15.82■□□□□ 0.12
LPCAT4Q643R3 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
LPCAT4Q643R3 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LPCAT4Q643R3 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC15.82■□□□□ 0.12
LPCAT4Q643R3 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC15.82■□□□□ 0.12
LPCAT4Q643R3 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC15.82■□□□□ 0.12
LPCAT4Q643R3 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LPCAT4Q643R3 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
LPCAT4Q643R3 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
LPCAT4Q643R3 FUT8-AS1-201ENST00000621019 1521 ntBASIC15.82■□□□□ 0.12
LPCAT4Q643R3 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LPCAT4Q643R3 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
LPCAT4Q643R3 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
LPCAT4Q643R3 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LPCAT4Q643R3 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC15.82■□□□□ 0.12
LPCAT4Q643R3 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LPCAT4Q643R3 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LPCAT4Q643R3 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
LPCAT4Q643R3 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC15.81■□□□□ 0.12
LPCAT4Q643R3 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC15.81■□□□□ 0.12
LPCAT4Q643R3 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
LPCAT4Q643R3 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
LPCAT4Q643R3 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC15.81■□□□□ 0.12
LPCAT4Q643R3 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LPCAT4Q643R3 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC15.81■□□□□ 0.12
LPCAT4Q643R3 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC15.81■□□□□ 0.12
LPCAT4Q643R3 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC15.81■□□□□ 0.12
LPCAT4Q643R3 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
LPCAT4Q643R3 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LPCAT4Q643R3 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LPCAT4Q643R3 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
LPCAT4Q643R3 PEX7-202ENST00000367756 680 ntTSL 3 BASIC15.81■□□□□ 0.12
LPCAT4Q643R3 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LPCAT4Q643R3 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
LPCAT4Q643R3 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
LPCAT4Q643R3 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
LPCAT4Q643R3 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LPCAT4Q643R3 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
LPCAT4Q643R3 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LPCAT4Q643R3 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
LPCAT4Q643R3 GGT3P-204ENST00000453783 1664 ntBASIC15.81■□□□□ 0.12
LPCAT4Q643R3 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC15.81■□□□□ 0.12
LPCAT4Q643R3 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC15.81■□□□□ 0.12
LPCAT4Q643R3 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
LPCAT4Q643R3 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC15.81■□□□□ 0.12
LPCAT4Q643R3 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC15.81■□□□□ 0.12
LPCAT4Q643R3 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC15.81■□□□□ 0.12
LPCAT4Q643R3 SSR4P1-203ENST00000599569 2260 ntBASIC15.81■□□□□ 0.12
LPCAT4Q643R3 AL359258.3-201ENST00000622910 2331 ntBASIC15.81■□□□□ 0.12
LPCAT4Q643R3 DECR2-212ENST00000627716 352 ntTSL 2 BASIC15.81■□□□□ 0.12
LPCAT4Q643R3 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC15.81■□□□□ 0.12
LPCAT4Q643R3 AC116562.4-202ENST00000641738 218 ntBASIC15.81■□□□□ 0.12
LPCAT4Q643R3 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LPCAT4Q643R3 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
LPCAT4Q643R3 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
LPCAT4Q643R3 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LPCAT4Q643R3 AC139749.1-202ENST00000617529 3139 ntBASIC15.81■□□□□ 0.12
LPCAT4Q643R3 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
LPCAT4Q643R3 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LPCAT4Q643R3 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC15.81■□□□□ 0.12
LPCAT4Q643R3 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
LPCAT4Q643R3 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
LPCAT4Q643R3 AC136621.1-201ENST00000624017 2304 ntBASIC15.8■□□□□ 0.12
LPCAT4Q643R3 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC15.8■□□□□ 0.12
LPCAT4Q643R3 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
LPCAT4Q643R3 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
LPCAT4Q643R3 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
LPCAT4Q643R3 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LPCAT4Q643R3 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
LPCAT4Q643R3 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
LPCAT4Q643R3 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
LPCAT4Q643R3 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
LPCAT4Q643R3 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LPCAT4Q643R3 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
LPCAT4Q643R3 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
LPCAT4Q643R3 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
LPCAT4Q643R3 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LPCAT4Q643R3 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
LPCAT4Q643R3 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
LPCAT4Q643R3 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LPCAT4Q643R3 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LPCAT4Q643R3 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
LPCAT4Q643R3 AC097374.2-201ENST00000618617 1306 ntBASIC15.8■□□□□ 0.12
LPCAT4Q643R3 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
LPCAT4Q643R3 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC15.8■□□□□ 0.12
LPCAT4Q643R3 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC15.8■□□□□ 0.12
LPCAT4Q643R3 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC15.8■□□□□ 0.12
LPCAT4Q643R3 GXYLT1P6-201ENST00000456472 1187 ntBASIC15.8■□□□□ 0.12
LPCAT4Q643R3 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC15.8■□□□□ 0.12
LPCAT4Q643R3 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms