Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TTC39BQ5VTQ0 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TTC39BQ5VTQ0 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC17.45■□□□□ 0.38
TTC39BQ5VTQ0 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC17.45■□□□□ 0.38
TTC39BQ5VTQ0 BCAR1-209ENST00000546196 1340 ntBASIC17.45■□□□□ 0.38
TTC39BQ5VTQ0 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TTC39BQ5VTQ0 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
TTC39BQ5VTQ0 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TTC39BQ5VTQ0 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC17.44■□□□□ 0.38
TTC39BQ5VTQ0 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TTC39BQ5VTQ0 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC17.44■□□□□ 0.38
TTC39BQ5VTQ0 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TTC39BQ5VTQ0 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
TTC39BQ5VTQ0 AL353732.1-201ENST00000569618 1459 ntBASIC17.44■□□□□ 0.38
TTC39BQ5VTQ0 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
TTC39BQ5VTQ0 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC17.44■□□□□ 0.38
TTC39BQ5VTQ0 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TTC39BQ5VTQ0 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TTC39BQ5VTQ0 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC17.44■□□□□ 0.38
TTC39BQ5VTQ0 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC17.44■□□□□ 0.38
TTC39BQ5VTQ0 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC17.44■□□□□ 0.38
TTC39BQ5VTQ0 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TTC39BQ5VTQ0 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
TTC39BQ5VTQ0 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TTC39BQ5VTQ0 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TTC39BQ5VTQ0 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
TTC39BQ5VTQ0 KRT18P13-201ENST00000400056 1290 ntBASIC17.44■□□□□ 0.38
TTC39BQ5VTQ0 MCCD1P2-201ENST00000423228 335 ntBASIC17.44■□□□□ 0.38
TTC39BQ5VTQ0 AL513480.1-201ENST00000451731 511 ntBASIC17.44■□□□□ 0.38
TTC39BQ5VTQ0 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
TTC39BQ5VTQ0 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC17.44■□□□□ 0.38
TTC39BQ5VTQ0 SMN2-210ENST00000511812 867 ntTSL 2 BASIC17.44■□□□□ 0.38
TTC39BQ5VTQ0 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
TTC39BQ5VTQ0 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC17.44■□□□□ 0.38
TTC39BQ5VTQ0 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC17.44■□□□□ 0.38
TTC39BQ5VTQ0 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC17.44■□□□□ 0.38
TTC39BQ5VTQ0 AL645728.2-201ENST00000641974 660 ntBASIC17.44■□□□□ 0.38
TTC39BQ5VTQ0 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TTC39BQ5VTQ0 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC17.44■□□□□ 0.38
TTC39BQ5VTQ0 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
TTC39BQ5VTQ0 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC17.44■□□□□ 0.38
TTC39BQ5VTQ0 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
TTC39BQ5VTQ0 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TTC39BQ5VTQ0 AC078925.2-201ENST00000624013 1973 ntBASIC17.44■□□□□ 0.38
TTC39BQ5VTQ0 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TTC39BQ5VTQ0 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC17.44■□□□□ 0.38
TTC39BQ5VTQ0 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TTC39BQ5VTQ0 DOC2GP-204ENST00000639052 2548 ntBASIC17.44■□□□□ 0.38
TTC39BQ5VTQ0 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
TTC39BQ5VTQ0 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TTC39BQ5VTQ0 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC17.44■□□□□ 0.38
TTC39BQ5VTQ0 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TTC39BQ5VTQ0 RNF216P1-203ENST00000404404 2427 ntBASIC17.43■□□□□ 0.38
TTC39BQ5VTQ0 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
TTC39BQ5VTQ0 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TTC39BQ5VTQ0 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC17.43■□□□□ 0.38
TTC39BQ5VTQ0 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
TTC39BQ5VTQ0 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TTC39BQ5VTQ0 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC17.43■□□□□ 0.38
TTC39BQ5VTQ0 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
TTC39BQ5VTQ0 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TTC39BQ5VTQ0 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
TTC39BQ5VTQ0 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
TTC39BQ5VTQ0 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC17.43■□□□□ 0.38
TTC39BQ5VTQ0 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC17.43■□□□□ 0.38
TTC39BQ5VTQ0 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
TTC39BQ5VTQ0 AC023274.1-201ENST00000418278 595 ntBASIC17.43■□□□□ 0.38
TTC39BQ5VTQ0 HCG4-201ENST00000418983 998 ntBASIC17.43■□□□□ 0.38
TTC39BQ5VTQ0 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC17.43■□□□□ 0.38
TTC39BQ5VTQ0 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
TTC39BQ5VTQ0 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC17.43■□□□□ 0.38
TTC39BQ5VTQ0 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC17.43■□□□□ 0.38
TTC39BQ5VTQ0 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
TTC39BQ5VTQ0 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC17.43■□□□□ 0.38
TTC39BQ5VTQ0 KRT8P49-201ENST00000604166 1432 ntBASIC17.43■□□□□ 0.38
TTC39BQ5VTQ0 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
TTC39BQ5VTQ0 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC17.43■□□□□ 0.38
TTC39BQ5VTQ0 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TTC39BQ5VTQ0 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TTC39BQ5VTQ0 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
TTC39BQ5VTQ0 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC17.43■□□□□ 0.38
TTC39BQ5VTQ0 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TTC39BQ5VTQ0 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TTC39BQ5VTQ0 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TTC39BQ5VTQ0 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TTC39BQ5VTQ0 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TTC39BQ5VTQ0 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
TTC39BQ5VTQ0 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC17.43■□□□□ 0.38
TTC39BQ5VTQ0 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
TTC39BQ5VTQ0 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC17.42■□□□□ 0.38
TTC39BQ5VTQ0 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
TTC39BQ5VTQ0 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TTC39BQ5VTQ0 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TTC39BQ5VTQ0 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
TTC39BQ5VTQ0 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
TTC39BQ5VTQ0 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC17.42■□□□□ 0.38
TTC39BQ5VTQ0 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TTC39BQ5VTQ0 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
TTC39BQ5VTQ0 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TTC39BQ5VTQ0 YBX2P1-201ENST00000394192 760 ntBASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms