Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
SHROOM1Q2M3G4 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SHROOM1Q2M3G4 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
SHROOM1Q2M3G4 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
SHROOM1Q2M3G4 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
SHROOM1Q2M3G4 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SHROOM1Q2M3G4 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
SHROOM1Q2M3G4 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SHROOM1Q2M3G4 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC19.38■□□□□ 0.69
SHROOM1Q2M3G4 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC19.38■□□□□ 0.69
SHROOM1Q2M3G4 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
SHROOM1Q2M3G4 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
SHROOM1Q2M3G4 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC19.38■□□□□ 0.69
SHROOM1Q2M3G4 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
SHROOM1Q2M3G4 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
SHROOM1Q2M3G4 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC19.38■□□□□ 0.69
SHROOM1Q2M3G4 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
SHROOM1Q2M3G4 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC19.38■□□□□ 0.69
SHROOM1Q2M3G4 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC19.38■□□□□ 0.69
SHROOM1Q2M3G4 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SHROOM1Q2M3G4 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC19.38■□□□□ 0.69
SHROOM1Q2M3G4 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC19.38■□□□□ 0.69
SHROOM1Q2M3G4 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC19.38■□□□□ 0.69
SHROOM1Q2M3G4 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SHROOM1Q2M3G4 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SHROOM1Q2M3G4 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
SHROOM1Q2M3G4 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC19.38■□□□□ 0.69
SHROOM1Q2M3G4 SPTSSB-204ENST00000617024 1292 ntBASIC19.38■□□□□ 0.69
SHROOM1Q2M3G4 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC19.38■□□□□ 0.69
SHROOM1Q2M3G4 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC19.38■□□□□ 0.69
SHROOM1Q2M3G4 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
SHROOM1Q2M3G4 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC19.38■□□□□ 0.69
SHROOM1Q2M3G4 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SHROOM1Q2M3G4 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
SHROOM1Q2M3G4 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SHROOM1Q2M3G4 AL603756.1-201ENST00000606511 2163 ntBASIC19.37■□□□□ 0.69
SHROOM1Q2M3G4 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC19.37■□□□□ 0.69
SHROOM1Q2M3G4 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SHROOM1Q2M3G4 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC19.37■□□□□ 0.69
SHROOM1Q2M3G4 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC19.37■□□□□ 0.69
SHROOM1Q2M3G4 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC19.37■□□□□ 0.69
SHROOM1Q2M3G4 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC19.37■□□□□ 0.69
SHROOM1Q2M3G4 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC19.37■□□□□ 0.69
SHROOM1Q2M3G4 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
SHROOM1Q2M3G4 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SHROOM1Q2M3G4 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
SHROOM1Q2M3G4 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SHROOM1Q2M3G4 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SHROOM1Q2M3G4 HLA-H-201ENST00000383620 1096 ntBASIC19.37■□□□□ 0.69
SHROOM1Q2M3G4 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC19.37■□□□□ 0.69
SHROOM1Q2M3G4 RPL37AP1-201ENST00000412502 279 ntBASIC19.37■□□□□ 0.69
SHROOM1Q2M3G4 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC19.37■□□□□ 0.69
SHROOM1Q2M3G4 FAM207CP-201ENST00000443486 507 ntBASIC19.37■□□□□ 0.69
SHROOM1Q2M3G4 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC19.37■□□□□ 0.69
SHROOM1Q2M3G4 AC190387.1-201ENST00000551683 408 ntBASIC19.37■□□□□ 0.69
SHROOM1Q2M3G4 MPI-209ENST00000564003 1195 ntTSL 2 BASIC19.37■□□□□ 0.69
SHROOM1Q2M3G4 COQ9-214ENST00000567933 882 ntTSL 3 BASIC19.37■□□□□ 0.69
SHROOM1Q2M3G4 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC19.37■□□□□ 0.69
SHROOM1Q2M3G4 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC19.37■□□□□ 0.69
SHROOM1Q2M3G4 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
SHROOM1Q2M3G4 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SHROOM1Q2M3G4 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SHROOM1Q2M3G4 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SHROOM1Q2M3G4 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
SHROOM1Q2M3G4 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SHROOM1Q2M3G4 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SHROOM1Q2M3G4 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SHROOM1Q2M3G4 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC19.37■□□□□ 0.69
SHROOM1Q2M3G4 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC19.37■□□□□ 0.69
SHROOM1Q2M3G4 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SHROOM1Q2M3G4 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
SHROOM1Q2M3G4 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SHROOM1Q2M3G4 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SHROOM1Q2M3G4 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SHROOM1Q2M3G4 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SHROOM1Q2M3G4 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SHROOM1Q2M3G4 AC005915.1-201ENST00000624912 2018 ntBASIC19.36■□□□□ 0.69
SHROOM1Q2M3G4 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SHROOM1Q2M3G4 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
SHROOM1Q2M3G4 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SHROOM1Q2M3G4 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SHROOM1Q2M3G4 DPM2-202ENST00000373110 738 ntTSL 2 BASIC19.36■□□□□ 0.69
SHROOM1Q2M3G4 HNRNPA3P1-201ENST00000401429 1139 ntBASIC19.36■□□□□ 0.69
SHROOM1Q2M3G4 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC19.36■□□□□ 0.69
SHROOM1Q2M3G4 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
SHROOM1Q2M3G4 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SHROOM1Q2M3G4 HNRNPA3P5-201ENST00000455201 833 ntBASIC19.36■□□□□ 0.69
SHROOM1Q2M3G4 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC19.36■□□□□ 0.69
SHROOM1Q2M3G4 AC009407.1-201ENST00000568958 598 ntBASIC19.36■□□□□ 0.69
SHROOM1Q2M3G4 AC008738.7-201ENST00000609744 511 ntBASIC19.36■□□□□ 0.69
SHROOM1Q2M3G4 AL035252.4-201ENST00000624174 288 ntBASIC19.36■□□□□ 0.69
SHROOM1Q2M3G4 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SHROOM1Q2M3G4 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
SHROOM1Q2M3G4 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC19.36■□□□□ 0.69
SHROOM1Q2M3G4 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC19.36■□□□□ 0.69
SHROOM1Q2M3G4 RNF216P1-203ENST00000404404 2427 ntBASIC19.36■□□□□ 0.69
SHROOM1Q2M3G4 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC19.36■□□□□ 0.69
SHROOM1Q2M3G4 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC19.36■□□□□ 0.69
SHROOM1Q2M3G4 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SHROOM1Q2M3G4 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms